RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 WIPI2Q9Y4P8 454 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 SDK2Q58EX2 2172 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 TRAPPC6AO75865 159 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 CCL3P10147 92 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 KITLGP21583 273 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 RAC1P63000 192 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 CPEB3Q8NE35 698 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 ZNF488Q96MN9 340 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 SAMD10Q9BYL1 202 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 MRPL18Q9H0U6 180 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 RBM7Q9Y580 266 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 TRBV20OR9-2A0A075B6H5 130 aa15.21■□□□□ 0.03
CLSTN3-202ENST00000331148 WDR1O75083 606 aa15.21■□□□□ 0.03
CLSTN3-202ENST00000331148 TNFSF15O95150 251 aa15.21■□□□□ 0.03
CLSTN3-202ENST00000331148 COLCA1Q6ZS62 124 aa15.21■□□□□ 0.03
CLSTN3-202ENST00000331148 LINC00596Q86U02 117 aa15.21■□□□□ 0.03
CLSTN3-202ENST00000331148 DEFB124Q8NES8 71 aa15.21■□□□□ 0.03
CLSTN3-202ENST00000331148 OR10P1Q8NGE3 313 aa15.21■□□□□ 0.03
CLSTN3-202ENST00000331148 CIB3Q96Q77 187 aaPredicted RBP15.21■□□□□ 0.03
CLSTN3-202ENST00000331148 FBXL7Q9UJT9 491 aa15.21■□□□□ 0.03
CLSTN3-202ENST00000331148 RNF114Q9Y508 228 aa15.21■□□□□ 0.03
CLSTN3-202ENST00000331148 OTOGLQ3ZCN5 2332 aa15.21■□□□□ 0.02
CLSTN3-202ENST00000331148 TRAV39A0A0B4J263 110 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 F2Z2F3 143 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 NBL1P41271 181 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 SSR4P51571 173 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 RPS16P62249 146 aaKnown RBP15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 MMDQ15546 238 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 BAGE3Q86Y29 109 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 BAGE2Q86Y30 109 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 PROK2Q9HC23 129 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 KNTC1P50748 2209 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 ZNF716A6NP11 495 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 C21orf140B9A014 251 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 ZNHIT1O43257 154 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 TIMP3P35625 211 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 VWC2Q2TAL6 325 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 OR5A2Q8NGI9 324 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 PPIAL4AQ9Y536 164 aa15.2■□□□□ 0.02
CLSTN3-202ENST00000331148 C17orf112F2Z3M2 114 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 C3orf80F5H4A9 247 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 NDUFB8O95169 186 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 SYNGR4O95473 234 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 RAC3P60763 192 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 Q8N976 141 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 OR10G8Q8NGN5 311 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 CHODLQ9H9P2 273 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 DLL3Q9NYJ7 618 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 SLC45A2Q9UMX9 530 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 ARHGAP21Q5T5U3 1957 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 CTRLP40313 264 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 ZNF90Q03938 601 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 DRAM1Q8N682 238 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 STPG4Q8N801 248 aa15.19■□□□□ 0.02
CLSTN3-202ENST00000331148 EML6Q6ZMW3 1958 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 GJE1A6NN92 205 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 DNPH1O43598 174 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 HNF1AP20823 631 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 RBX1P62877 108 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 Q0VFX4 171 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 RNASE8Q8TDE3 154 aaKnown RBP15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 RNF2Q99496 336 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 TRAV9-1A0A075B6T8 112 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 TRAV38-1A0A0B4J264 116 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 C20orf202A1L168 122 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 SPINK2P20155 84 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 THBS3P49746 956 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 KRTDAPP60985 99 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 Q0VG73 95 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 TMEM249Q2WGJ8 235 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 GCSAMLQ5JQS6 135 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 MRPL21Q7Z2W9 205 aaKnown RBP15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 UBALD1Q8TB05 177 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 ZNF586Q9NXT0 402 aa15.18■□□□□ 0.02
CLSTN3-202ENST00000331148 SPAARA0A1B0GVQ0 90 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 LRRC30A6NM36 301 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 DIRC3C9JPN6 131 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 ZG16O60844 167 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 FTH1P19P0C7X4 201 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 P0C879 139 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 CCNOP22674 350 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 G6PCP35575 357 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 SPATA45Q537H7 98 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 RIPPLY2Q5TAB7 128 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 C1orf174Q8IYL3 243 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 SIGLECL1Q8N7X8 197 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 OR1L6Q8NGR2 347 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 APOBEC3DQ96AK3 386 aaPredicted RBP15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 ZNF552Q9H707 407 aaPredicted RBP15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 IL36BQ9NZH7 164 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 YLPM1P49750 1951 aaKnown RBP15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 KIAA1549Q9HCM3 1950 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 RNF212BA8MTL3 300 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 RAMP3O60896 148 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 OR5G3P0C626 314 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 Q8N7P7 452 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 ZDHHC16Q969W1 377 aa15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 GMPPAQ96IJ6 420 aaPredicted RBP15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 FAM103A1Q9BTL3 118 aaKnown RBP15.17■□□□□ 0.02
CLSTN3-202ENST00000331148 GAL3ST2Q9H3Q3 398 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms