RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 OPN3Q9H1Y3 402 aaPredicted RBP12□□□□□ -0.49
EPHB3-201ENST00000330394 IGHV3-21A0A0B4J1V1 117 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 J3QR89 54 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 RBP4P02753 201 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 C1QTNF9P0C862 333 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 IBA57Q5T440 356 aaKnown RBP11.99□□□□□ -0.49
EPHB3-201ENST00000330394 FAM89BQ8N5H3 189 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 ST6GALNAC6Q969X2 333 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 FBLN5Q9UBX5 448 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 ABCA4P78363 2273 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 OR2J3O76001 311 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 IGHV3-48P01763 117 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 CSN1S1P47710 185 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 MDP1Q86V88 176 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 OR1B1Q8NGR6 318 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 TIMM9Q9Y5J7 89 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 NPIPB13A6NJU9 1138 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 LRRC30A6NM36 301 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 NPIPB4C9JG80 1138 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 C5orf67F2Z3F1 127 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 COL8A1P27658 744 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 LEMD1Q68G75 181 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 TMEM171Q8WVE6 324 aa11.99□□□□□ -0.49
EPHB3-201ENST00000330394 PSMG3Q9BT73 122 aaPredicted RBP11.99□□□□□ -0.49
EPHB3-201ENST00000330394 IGHV3OR15-7A0A075B7D8 119 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 TEX50A0A1B0GTY4 177 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 NAPSAO96009 420 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 LRRC75BQ2VPJ9 315 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 MUC15Q8N387 334 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 ZNF525Q8N782 197 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 ZCCHC14Q8WYQ9 949 aaKnown RBP11.98□□□□□ -0.49
EPHB3-201ENST00000330394 VOPP1Q96AW1 172 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 IGKV3D-11A0A0A0MRZ8 115 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 FAM87AP0C7U9 286 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 MEOX1P50221 254 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 RNPS1Q15287 305 aaKnown RBP11.98□□□□□ -0.49
EPHB3-201ENST00000330394 SLC25A45Q8N413 288 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 OR8A1Q8NGG7 326 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 C18orf12Q96KH6 178 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 TMEM140Q9NV12 185 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 SERF1AO75920 110 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 HGFACQ04756 655 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 CPEB3Q8NE35 698 aaKnown RBP11.98□□□□□ -0.49
EPHB3-201ENST00000330394 OR8G5Q8NG78 346 aa11.98□□□□□ -0.49
EPHB3-201ENST00000330394 SP7Q8TDD2 431 aaPredicted RBP11.98□□□□□ -0.49
EPHB3-201ENST00000330394 TMSB15BA0A087X1C1 80 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 MARCH11A6NNE9 402 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 J3QR06 171 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 K7ERU9 68 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 SP1P08047 785 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 OR4A8P0C604 315 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 IL3RAP26951 378 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 PPOXP50336 477 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 PDPNQ86YL7 162 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 IFITM10A6NMD0 228 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 RRHO14718 337 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 IGHV2-70P01814 119 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 FOXA3P55318 350 aaPredicted RBP11.97□□□□□ -0.49
EPHB3-201ENST00000330394 COX19Q49B96 90 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 TBL2Q9Y4P3 447 aaKnown RBP11.97□□□□□ -0.49
EPHB3-201ENST00000330394 RHBDL1O75783 438 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 P01737 135 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 ZNF664Q8N3J9 261 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 LEAP2Q969E1 77 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 TMEM56Q96MV1 263 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 PROCRQ9UNN8 238 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 ODAMA1E959 279 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 REG1BP48304 166 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 SRSF4Q08170 494 aaKnown RBP11.97□□□□□ -0.49
EPHB3-201ENST00000330394 WDYHV1Q96HA8 205 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 TCFL5Q9UL49 500 aa11.97□□□□□ -0.49
EPHB3-201ENST00000330394 YTHDF2Q9Y5A9 579 aaKnown RBP11.97□□□□□ -0.49
EPHB3-201ENST00000330394 A0A1W2PRD5 423 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 A0A1W2PRF3 423 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 A0A1W2PRM7 423 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 DPRXA6NFQ7 191 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 WISP1O95388 367 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 MAP1LC3CQ9BXW4 147 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 TRPM7Q96QT4 1865 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 SCO2A0A1W2PP80 73 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 SMPD2O60906 423 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 ID3Q02535 119 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 S100A7AQ86SG5 101 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 WFDC8Q8IUA0 241 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 GTF3AQ92664 365 aaKnown RBP11.96□□□□□ -0.49
EPHB3-201ENST00000330394 FAM131CQ96AQ9 280 aa11.96□□□□□ -0.49
EPHB3-201ENST00000330394 IGKV1-12A0A0C4DH73 117 aa11.96□□□□□ -0.5
EPHB3-201ENST00000330394 GDF9O60383 454 aa11.96□□□□□ -0.5
EPHB3-201ENST00000330394 IGKV1D-12P01611 117 aa11.96□□□□□ -0.5
EPHB3-201ENST00000330394 GZMHP20718 246 aa11.96□□□□□ -0.5
EPHB3-201ENST00000330394 COMPP49747 757 aaPredicted RBP11.96□□□□□ -0.5
EPHB3-201ENST00000330394 CDPF1Q6NVV7 123 aa11.96□□□□□ -0.5
EPHB3-201ENST00000330394 C1QL4Q86Z23 238 aa11.96□□□□□ -0.5
EPHB3-201ENST00000330394 ZBTB34Q8NCN2 500 aa11.96□□□□□ -0.5
EPHB3-201ENST00000330394 OR5R1Q8NH85 324 aa11.96□□□□□ -0.5
EPHB3-201ENST00000330394 EFNA2O43921 213 aa11.95□□□□□ -0.5
EPHB3-201ENST00000330394 MT-ND6P03923 174 aa11.95□□□□□ -0.5
EPHB3-201ENST00000330394 CLEC3BP05452 202 aa11.95□□□□□ -0.5
EPHB3-201ENST00000330394 LYZP61626 148 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms