RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 Q9N2K0 584 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 PIPOXQ9P0Z9 390 aa11.15□□□□□ -0.62
CTHRC1-201ENST00000330295 A0A075B6Q4 140 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 SMIM30A4D0T7 59 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 FOXI3A8MTJ6 420 aaPredicted RBP11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 TRDCB7Z8K6 153 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 SLC31A2O15432 143 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 AIREO43918 545 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 NDUFB8O95169 186 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 MOSP00540 346 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 SLC2A2P11168 524 aaPredicted RBP11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 HIST1H1DP16402 221 aaKnown RBP11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 MXD1Q05195 221 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 GNMTQ14749 295 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 PLAC9Q5JTB6 97 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 LYG2Q86SG7 212 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 Q8N402 240 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 NEURL2Q9BR09 285 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 HDHD3Q9BSH5 251 aaPredicted RBP11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 SLC23A1Q9UHI7 598 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 FBXO7Q9Y3I1 522 aa11.14□□□□□ -0.63
CTHRC1-201ENST00000330295 A0A0B4J203 849 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 TRAV41A0A0B4J266 112 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 IZUMO1RA6ND01 250 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 ITGB1BP1O14713 200 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 RAB29O14966 203 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 ATP6V0E1O15342 81 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 GNB3P16520 340 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 ATF4P18848 351 aaPredicted RBP11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 CEACAM6P40199 344 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 ZNF134P52741 427 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 IDNKQ5T6J7 187 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 OR4A4PQ8NGN8 299 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 WFDC10AQ9H1F0 79 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 ZNF221Q9UK13 617 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 ETV7Q9Y603 341 aa11.13□□□□□ -0.63
CTHRC1-201ENST00000330295 RAB27BO00194 218 aa11.12□□□□□ -0.63
CTHRC1-201ENST00000330295 IGHV3-11P01762 117 aa11.12□□□□□ -0.63
CTHRC1-201ENST00000330295 F2RL1P55085 397 aa11.12□□□□□ -0.63
CTHRC1-201ENST00000330295 CDNFQ49AH0 187 aa11.12□□□□□ -0.63
CTHRC1-201ENST00000330295 FAM71F2Q6NXP2 309 aa11.12□□□□□ -0.63
CTHRC1-201ENST00000330295 IL34Q6ZMJ4 242 aa11.12□□□□□ -0.63
CTHRC1-201ENST00000330295 NR2C2APQ86WQ0 139 aa11.12□□□□□ -0.63
CTHRC1-201ENST00000330295 MINDY2Q8NBR6 621 aa11.12□□□□□ -0.63
CTHRC1-201ENST00000330295 RNF183Q96D59 192 aa11.12□□□□□ -0.63
CTHRC1-201ENST00000330295 MFNGO00587 321 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 FABP7O15540 132 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 XRCC3O43542 346 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 DIRAS3O95661 229 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 FCGR3AP08637 254 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 GSTP1P09211 210 aaKnown RBP11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 SCTP09683 121 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 DTYMKP23919 212 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 PLA2G7Q13093 441 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 MOGAT2Q3SYC2 334 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 OR9G4Q8NGQ1 327 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 OR10J5Q8NHC4 309 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 LGALS14Q8TCE9 139 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 CASTOR1Q8WTX7 329 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 GINS4Q9BRT9 223 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 PARP11Q9NR21 331 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 DIABLOQ9NR28 239 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 RHBDL2Q9NX52 303 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 SLC2A8Q9NY64 477 aa11.11□□□□□ -0.63
CTHRC1-201ENST00000330295 A0A0A6YYH2 397 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 A6NJ64 397 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 RTL8CO15255 209 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 SOX15O60248 233 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 CDK2AP2O75956 126 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 CD7P09564 240 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 CTXN2P0C2S0 81 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 MC5RP33032 325 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 GNG2P59768 71 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 ZNF45Q02386 682 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 LSAMPQ13449 338 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 HACD4Q5VWC8 232 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 ZNF833PQ6ZTB9 187 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 Q8N1X5 172 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 ZNF251Q9BRH9 671 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 DCSTAMPQ9H295 470 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 KCNK7Q9Y2U2 307 aa11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 RBM7Q9Y580 266 aaKnown RBP11.1□□□□□ -0.63
CTHRC1-201ENST00000330295 SAA2-SAA4A0A096LPE2 208 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 OR11H12B2RN74 326 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 BET1O15155 118 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 CLEC2LP0C7M8 214 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 SAA2P0DJI9 122 aaPredicted RBP11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 C5orf24Q7Z6I8 188 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 WFDC3Q8IUB2 231 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 LAX1Q8IWV1 398 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 YIPF6Q96EC8 236 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 CYYR1Q96J86 154 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 MRPL20Q9BYC9 149 aaKnown RBP11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 C11orf54Q9H0W9 315 aaPredicted RBP11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 IFI27L2Q9H2X8 130 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 RNF167Q9H6Y7 350 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 RDH8Q9NYR8 311 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 OR1A1Q9P1Q5 309 aa11.09□□□□□ -0.63
CTHRC1-201ENST00000330295 A0A1W2PN81 502 aa11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 OR5H14A6NHG9 310 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms