RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 IGSF10Q6WRI0 2623 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 A0A1B0GUS0 222 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 CEBPZOSA8MTT3 80 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 KIAA1324LA8MWY0 1029 aaPredicted RBP6.36□□□□□ -1.39
TRIM55-202ENST00000315962 CD40P25942 277 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 PMELP40967 661 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 CD200P41217 278 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 ERVK11-1P61568 191 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 PRB3Q04118 309 aaPredicted RBP6.36□□□□□ -1.39
TRIM55-202ENST00000315962 ADIRFQ15847 76 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 SELENOHQ8IZQ5 122 aaKnown RBP6.36□□□□□ -1.39
TRIM55-202ENST00000315962 CD177Q8N6Q3 437 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 CLDND2Q8NHS1 167 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 TVP23CQ96ET8 276 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 FAM210BQ96KR6 192 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 PACRGQ96M98 296 aaPredicted RBP6.36□□□□□ -1.39
TRIM55-202ENST00000315962 PLK3Q9H4B4 646 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 RPRMQ9NS64 109 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 ARFGEF3Q5TH69 2177 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 A0A087X0M5 115 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 A0A1B0GX30 115 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 C16orf97H3BN30 126 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 PSG2P11465 335 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 CEACAM8P31997 349 aaPredicted RBP6.36□□□□□ -1.39
TRIM55-202ENST00000315962 KLF3P57682 345 aaPredicted RBP6.36□□□□□ -1.39
TRIM55-202ENST00000315962 ARL16Q0P5N6 197 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF266Q14584 549 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 Q6ZRM9 215 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 Q8NFD4 153 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 TMEM222Q9H0R3 208 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 HIVEP3Q5T1R4 2406 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 CELSR2Q9HCU4 2923 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 DPRXA6NFQ7 191 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF726P1Q15940 193 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF787Q6DD87 383 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 OR8G2PQ6IF36 304 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 ACP7Q6ZNF0 438 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 SAXO1Q8IYX7 474 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 C1orf162Q8NEQ5 155 aaPredicted RBP6.35□□□□□ -1.39
TRIM55-202ENST00000315962 OR13A1Q8NGR1 328 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 MISP3Q96FF7 219 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 ABHD14BQ96IU4 210 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 PKIBQ9C010 78 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 CXXC4Q9H2H0 198 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 PLEKHF2Q9H8W4 249 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.35□□□□□ -1.39
TRIM55-202ENST00000315962 SEC14L6B5MCN3 397 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 PITX3O75364 302 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 CD33P20138 364 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 LMO1P25800 156 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 TMPRSS3P57727 454 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 HLA-DRB3P79483 266 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 CCDC71LQ8N9Z2 235 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 CCL17Q92583 94 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 COQ2Q96H96 371 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 SFXN3Q9BWM7 321 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 LYRM2Q9NU23 88 aaPredicted RBP6.35□□□□□ -1.39
TRIM55-202ENST00000315962 KIAA1456Q9P272 454 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 TMED3Q9Y3Q3 217 aa6.35□□□□□ -1.39
TRIM55-202ENST00000315962 IGKV1D-17A0A075B6S4 117 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 BTBD17A6NE02 478 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 C12orf77C9JDV5 145 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.34□□□□□ -1.39
TRIM55-202ENST00000315962 CA11O75493 328 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 PLAUP00749 431 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 THBDP07204 575 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 OR4A8P0C604 315 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 G0S2P27469 103 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 PRDX2P32119 198 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 PAX9P55771 341 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 SPANXN5Q5MJ07 72 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 FAM90A2PQ658T7 463 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF497Q6ZNH5 498 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 COMMD1Q8N668 190 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 GCSAMQ8N6F7 178 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 MALSU1Q96EH3 234 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 HIST1H2BLQ99880 126 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 CABLES2Q9BTV7 478 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 RBKSQ9H477 322 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 SLC25A22Q9H936 323 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 DECR2Q9NUI1 292 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 ZNRD1Q9P1U0 126 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 CACNG5Q9UF02 275 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 LAMP3Q9UQV4 416 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 ZFHX3Q15911 3703 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 KIR2DS1A0A191URI9 304 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 UBE2L5PA0A1B0GUS4 154 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 A0A1W2PPQ1 181 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 LYNX1G3V0Z9 82 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 CCL21O00585 134 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 RAMP3O60896 148 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 PGLYRP1O75594 196 aaPredicted RBP6.34□□□□□ -1.39
TRIM55-202ENST00000315962 LY6HO94772 140 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 LYNX1P0DP58 116 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 HNF1AP20823 631 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 DDTP30046 118 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 IL2RGP31785 369 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 KIR2DS4P43632 304 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 KIR2DS1Q14954 304 aa6.34□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF146Q15072 292 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms