RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CADM4Q8NFZ8 388 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 M0R381 172 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 CBLN1P23435 193 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 SRD5A2P31213 254 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 LHFPL4Q7Z7J7 247 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 PGPA6NDG6 321 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 SYNGR3O43761 229 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 LINC00596Q86U02 117 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 LOC390937A0A1W2PQ73 354 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 TMEM155Q4W5P6 130 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 HIKESHIQ53FT3 197 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 PRRT4C9JH25 899 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 SLC6A13Q9NSD5 602 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 ZNF345Q14585 488 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 ZBP1Q9H171 429 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 FAM71F2Q6NXP2 309 aa11.65□□□□□ -0.54
TRIM56-201ENST00000306085 RPL27AP46776 148 aaKnown RBP11.65□□□□□ -0.55
TRIM56-201ENST00000306085 SHISA4Q96DD7 197 aa11.65□□□□□ -0.55
TRIM56-201ENST00000306085 SDHCQ99643 169 aaPredicted RBP11.65□□□□□ -0.55
TRIM56-201ENST00000306085 CLDN14O95500 239 aa11.65□□□□□ -0.55
TRIM56-201ENST00000306085 PDLIM7Q9NR12 457 aa11.65□□□□□ -0.55
TRIM56-201ENST00000306085 DXOO77932 396 aaKnown RBP11.64□□□□□ -0.55
TRIM56-201ENST00000306085 MESTQ5EB52 335 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 GOLT1AQ6ZVE7 132 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 C7orf66A4D0T2 115 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 GHRHP01286 108 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 PUSL1Q8N0Z8 303 aaKnown RBP11.64□□□□□ -0.55
TRIM56-201ENST00000306085 WNT2BQ93097 391 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 SSC5DA1L4H1 1573 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 KLF4O43474 513 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 FAM106AQ4KMX7 169 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 SPSB4Q96A44 273 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 ACER2Q5QJU3 275 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 SMDT1Q9H4I9 107 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 TUBD1Q9UJT1 453 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 C5P01031 1676 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 H7C1H1 209 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 DLL1O00548 723 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 GAGE2EQ4V326 116 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 LRRC61Q9BV99 259 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 GAGE2DQ9UEU5 116 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 TTC9CQ8N5M4 171 aa11.64□□□□□ -0.55
TRIM56-201ENST00000306085 TRBV9A0A0B4J1U6 114 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 ATP5G2Q06055 141 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 SPEM2Q0P670 501 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 C16orf47Q6ZP98 133 aaPredicted RBP11.63□□□□□ -0.55
TRIM56-201ENST00000306085 DIRC2Q96SL1 478 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 LMO7DNF2Z398 122 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 PNLIPP16233 465 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 H3BUT2 72 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 ISG15P05161 165 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 TDGF1P3P51864 188 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 DEFB123Q8N688 67 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 CST9LQ9H4G1 147 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 CLEC2AQ6UVW9 174 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 MS4A6AQ9H2W1 248 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 ORAOV1Q8WV07 137 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 ZNF430Q9H8G1 570 aaPredicted RBP11.63□□□□□ -0.55
TRIM56-201ENST00000306085 TOGARAM1Q9Y4F4 1720 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 A0A0U1RQV5 110 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 RPL8P62917 257 aaKnown RBP11.63□□□□□ -0.55
TRIM56-201ENST00000306085 MRM2Q9UI43 246 aaKnown RBP11.63□□□□□ -0.55
TRIM56-201ENST00000306085 PAQR9Q6ZVX9 377 aa11.63□□□□□ -0.55
TRIM56-201ENST00000306085 SSBP3Q9BWW4 388 aaPredicted RBP11.63□□□□□ -0.55
TRIM56-201ENST00000306085 IGLV3-10A0A075B6K4 115 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 HPRT1P00492 218 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 SUMO4Q6EEV6 95 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 WDR54Q9H977 334 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 TRAV8-1A0A0A6YYK1 113 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 UNQ5815/PRO19632Q6UWF5 114 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 DUX3Q96PT4 197 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 TNFRSF12AQ9NP84 129 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 MUC21A0A0G2JKD1 596 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 MUC21A0A140T8X8 626 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 MUC21Q5SSG8 566 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 MZB1Q8WU39 189 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 C1QL1O75973 258 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 GAPDHP04406 335 aaKnown RBP11.62□□□□□ -0.55
TRIM56-201ENST00000306085 ZFP64Q9NPA5 681 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.62□□□□□ -0.55
TRIM56-201ENST00000306085 HSPB1P04792 205 aaKnown RBP11.62□□□□□ -0.55
TRIM56-201ENST00000306085 SPNS2Q8IVW8 549 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 DNAJC4Q9NNZ3 241 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 PGPEP1LA6NFU8 196 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 ALKAL1Q6UXT8 129 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 H0YL77 283 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 RND2P52198 227 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 PMS2CLQ68D20 193 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 ZNF784Q8NCA9 323 aaPredicted RBP11.62□□□□□ -0.55
TRIM56-201ENST00000306085 FHITP49789 147 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 LY6EQ16553 131 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 RPL32P62910 135 aaKnown RBP11.62□□□□□ -0.55
TRIM56-201ENST00000306085 ACSF3Q4G176 576 aaPredicted RBP11.62□□□□□ -0.55
TRIM56-201ENST00000306085 TNFRSF14Q92956 283 aa11.62□□□□□ -0.55
TRIM56-201ENST00000306085 THADAQ6YHU6 1953 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 P2RY4P51582 365 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 GUSBP11Q6P575 273 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 ADRA2AP08913 450 aa11.61□□□□□ -0.55
TRIM56-201ENST00000306085 SPG11Q96JI7 2443 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms