RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 F8W036 122 aa15.98■□□□□ 0.15
HOXC4-201ENST00000303406 LOXP28300 417 aaPredicted RBP15.98■□□□□ 0.15
HOXC4-201ENST00000303406 LINC00205P59089 165 aa15.98■□□□□ 0.15
HOXC4-201ENST00000303406 RPL31P62899 125 aaKnown RBP15.98■□□□□ 0.15
HOXC4-201ENST00000303406 PEA15Q15121 130 aa15.98■□□□□ 0.15
HOXC4-201ENST00000303406 POU2AF1Q16633 256 aa15.98■□□□□ 0.15
HOXC4-201ENST00000303406 ZNF672Q499Z4 452 aaPredicted RBP15.98■□□□□ 0.15
HOXC4-201ENST00000303406 AKR1C8PQ5T2L2 129 aa15.98■□□□□ 0.15
HOXC4-201ENST00000303406 SLC25A24Q6NUK1 477 aa15.98■□□□□ 0.15
HOXC4-201ENST00000303406 FAM213BQ8TBF2 198 aa15.98■□□□□ 0.15
HOXC4-201ENST00000303406 ZNF714Q96N38 554 aa15.98■□□□□ 0.15
HOXC4-201ENST00000303406 TIMM9Q9Y5J7 89 aa15.98■□□□□ 0.15
HOXC4-201ENST00000303406 DSPP15924 2871 aaKnown RBP15.97■□□□□ 0.15
HOXC4-201ENST00000303406 FAM157AC9JC47 383 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 OR9G9P0C7N8 305 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 NFYBP25208 207 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 ID4P47928 161 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 PPOXP50336 477 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 SPCS3P61009 180 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 DEFA5Q01523 94 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 AKR1C1Q04828 323 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 SLC38A11Q08AI6 406 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 ZNF273Q14593 569 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 PRAMEF5Q5TYX0 476 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 PUSL1Q8N0Z8 303 aaKnown RBP15.97■□□□□ 0.15
HOXC4-201ENST00000303406 LILRB2Q8N423 598 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 PINX1Q96BK5 328 aaKnown RBP15.97■□□□□ 0.15
HOXC4-201ENST00000303406 OR4C12Q96R67 309 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 PBDC1Q9BVG4 233 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 SCRT1Q9BWW7 348 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 DCHS1Q96JQ0 3298 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 BOD1L1Q8NFC6 3051 aa15.97■□□□□ 0.15
HOXC4-201ENST00000303406 POLEQ07864 2286 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 USF3Q68DE3 2245 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 PMS2P5A8MQ11 134 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 C1QL1O75973 258 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 FHITP49789 147 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 SERF2P84101 59 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 SP5Q6BEB4 398 aaPredicted RBP15.96■□□□□ 0.15
HOXC4-201ENST00000303406 DHRS7BQ6IAN0 325 aaPredicted RBP15.96■□□□□ 0.15
HOXC4-201ENST00000303406 FAM71F2Q6NXP2 309 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 C1orf229Q6ZS94 237 aaPredicted RBP15.96■□□□□ 0.15
HOXC4-201ENST00000303406 ZNF429Q86V71 674 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 LYG1Q8N1E2 194 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 MUC15Q8N387 334 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 ZNF596Q8TC21 504 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 CA5BP1Q8WTZ4 195 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 WDR61Q9GZS3 305 aaKnown RBP15.96■□□□□ 0.15
HOXC4-201ENST00000303406 FAM96BQ9Y3D0 163 aa15.96■□□□□ 0.15
HOXC4-201ENST00000303406 CEBPZOSA8MTT3 80 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 SIAH2O43255 324 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 MMP23AO75900 390 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 PLAUP00749 431 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 HBE1P02100 147 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 GNB2P62879 340 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 RUNX1Q01196 453 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 TAGLNQ01995 201 aaKnown RBP15.95■□□□□ 0.14
HOXC4-201ENST00000303406 TLE4Q04727 773 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 GUK1Q16774 197 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 HFEQ30201 348 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 UTF1Q5T230 341 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 CENPVQ7Z7K6 275 aaPredicted RBP15.95■□□□□ 0.14
HOXC4-201ENST00000303406 THNSL2Q86YJ6 484 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 LINC00311Q8N616 119 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 OR4A16Q8NH70 328 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 LEAP2Q969E1 77 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 TMEM147Q9BVK8 224 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 NKX6-2Q9C056 277 aaPredicted RBP15.95■□□□□ 0.14
HOXC4-201ENST00000303406 MS4A7Q9GZW8 240 aaPredicted RBP15.95■□□□□ 0.14
HOXC4-201ENST00000303406 TMEM231Q9H6L2 316 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 TLN1Q9Y490 2541 aaKnown RBP15.95■□□□□ 0.14
HOXC4-201ENST00000303406 DMXL2Q8TDJ6 3036 aa15.95■□□□□ 0.14
HOXC4-201ENST00000303406 TRBV23-1A0A0A0MS06 115 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 RBMXL2O75526 392 aaKnown RBP15.94■□□□□ 0.14
HOXC4-201ENST00000303406 FCN3O75636 299 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 GRNP28799 593 aaKnown RBP15.94■□□□□ 0.14
HOXC4-201ENST00000303406 RPP30P78346 268 aaKnown RBP15.94■□□□□ 0.14
HOXC4-201ENST00000303406 RELBQ01201 579 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 VWC2Q2TAL6 325 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 TMEM200BQ69YZ2 307 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 ZNF833PQ6ZTB9 187 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 ZNF383Q8NA42 475 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 QTRT1Q9BXR0 403 aaKnown RBP15.94■□□□□ 0.14
HOXC4-201ENST00000303406 TMEM140Q9NV12 185 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 TRAV1-1A0A0B4J248 108 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 AGPAT2O15120 278 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 IGHV3-7P01780 117 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 ARG1P05089 322 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 H2AFB1P0C5Y9 115 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 SFTA3P0C7M3 94 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 RAB2AP61019 212 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 TFF3Q07654 80 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 SPSB3Q6PJ21 355 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 ATRAIDQ6UW56 229 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 LYPD2Q6UXB3 125 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 OR10P1Q8NGE3 313 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 CLCC1Q96S66 551 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 AIFM2Q9BRQ8 373 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 CTSZQ9UBR2 303 aa15.94■□□□□ 0.14
HOXC4-201ENST00000303406 KPTNQ9Y664 436 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms