RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 LIFP15018 202 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 UNC119Q13432 240 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 DCAF10Q5QP82 559 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 LINC01465Q8N7H1 131 aa8.96□□□□□ -0.97
CLIP1-201ENST00000302528 TAF15Q92804 592 aaKnown RBP eCLIP8.96□□□□□ -0.97
CLIP1-201ENST00000302528 ZIC3O60481 467 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 SPSB4Q96A44 273 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 SCGB3A1Q96QR1 104 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 IDI2-AS1Q9NZ38 188 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 KLK13Q9UKR3 277 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 TRAV8-2A0A0B4J237 113 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 PPIAL4CA0A0B4J2A2 164 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 CXorf51AA0A1B0GTR3 108 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 NPIPB4C9JG80 1138 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 CA1P00915 261 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-201ENST00000302528 PPIAL4GP0DN37 164 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 ASIPP42127 132 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 ATP5J2P56134 94 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 CEACAM21Q3KPI0 293 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 Q5PR19 223 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 TTTY12Q9BZ98 90 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 PLA2G2FQ9BZM2 168 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 CALYQ9NYX4 217 aa8.96□□□□□ -0.98
CLIP1-201ENST00000302528 TRAV24A0A0B4J272 114 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 IGFBP6P24592 240 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-201ENST00000302528 TMEM92Q6UXU6 159 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 DNM1P46Q6ZS02 220 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 VCX2Q9H322 139 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 ST6GALNAC2Q9UJ37 374 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 V9GYH0 126 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 IGHV3-35A0A0C4DH35 117 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 OR2H2O95918 312 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 FTH1P19P0C7X4 201 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 SAPCD1Q5SSQ6 148 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 MSRB3Q8IXL7 192 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 ST6GALNAC3Q8NDV1 305 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 A0A1W2PP11 408 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 PRR32B1ATL7 298 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 IFNL4K9M1U5 179 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 NDUFA2O43678 99 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 SAA1P0DJI8 122 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-201ENST00000302528 CDK5RAP2Q96SN8 1893 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 SMCHD1A6NHR9 2005 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 ABCA3Q99758 1704 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 TRBV9A0A0B4J1U6 114 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 GRIFINA4D1Z8 144 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 NPIPB11E5RHQ5 1161 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 WFIKKN1Q96NZ8 548 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 FOXJ2Q9P0K8 574 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 TRGV2A0A075B6R0 118 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 IGHV3OR16-13A0A075B7E8 117 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 IGHV3-74A0A0B4J1X5 117 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 C19orf67A6NJJ6 358 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 NPIPB8E9PQR5 432 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 NPIPB9F8W1W9 429 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 SMAD7O15105 426 aaKnown RBP8.95□□□□□ -0.98
CLIP1-201ENST00000302528 NPIPB7O75200 414 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 FGF12P61328 243 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 OR2K2Q8NGT1 345 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 PLSCR2Q9NRY7 297 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 TMEM30AQ9NV96 361 aa8.95□□□□□ -0.98
CLIP1-201ENST00000302528 HOXD4P09016 255 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-201ENST00000302528 WDR34Q96EX3 536 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 IGHV3OR16-10A0A075B7F0 116 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 SYNGR3O43761 229 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 BGLAPP02818 100 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 HSPE1P61604 102 aaKnown RBP8.94□□□□□ -0.98
CLIP1-201ENST00000302528 KIAA0040Q15053 153 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 TMEM222Q9H0R3 208 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 SH3BGRL3Q9H299 93 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 ATP5LO75964 103 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 C1QL1O75973 258 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 COL9A1P20849 921 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 ABHD12Q8N2K0 398 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 SSBP3Q9BWW4 388 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-201ENST00000302528 CXCL10P02778 98 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 SCTP09683 121 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 PAX2Q02962 417 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 P2RY6Q15077 328 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 CLDND2Q8NHS1 167 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 ZNF385AQ96PM9 386 aaKnown RBP8.94□□□□□ -0.98
CLIP1-201ENST00000302528 SLC25A15Q9Y619 301 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 PHIPQ8WWQ0 1821 aa8.94□□□□□ -0.98
CLIP1-201ENST00000302528 LOC105371242A0A075B767 164 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 IGKV3D-20A0A0C4DH25 116 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 H0YL77 283 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 NKX2-8O15522 239 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 TMEM50AO95807 157 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 ZIC1Q15915 447 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 MS4A3Q96HJ5 214 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 RPP25Q9BUL9 199 aaKnown RBP8.93□□□□□ -0.98
CLIP1-201ENST00000302528 SEMA5BQ9P283 1151 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 COL24A1Q17RW2 1714 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 CXorf65A6NEN9 183 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 SNAI2O43623 268 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 FCARP24071 287 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 CD69Q07108 199 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 FGFRL1Q8N441 504 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 SPCS1Q9Y6A9 102 aa8.93□□□□□ -0.98
CLIP1-201ENST00000302528 IGLV3-16A0A075B6K0 115 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms