RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 TMEM186Q96B77 213 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 GPR82Q96P67 336 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 IGHV3-72A0A0B4J1Y9 119 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 K7N7A8 449 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 PRDX2P32119 198 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 WDYHV1Q96HA8 205 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 HEXA-AS1Q9H8Q6 139 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 SSPNQ14714 243 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 TMEM170BQ5T4T1 132 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 GPBAR1Q8TDU6 330 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 GALNT14Q96FL9 552 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 TMEM50AO95807 157 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 FGF5P12034 268 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 MAGEA5P43359 124 aa12.8□□□□□ -0.36
SCN3B-201ENST00000299333 RPS20P60866 119 aaKnown RBP12.8□□□□□ -0.36
SCN3B-201ENST00000299333 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
SCN3B-201ENST00000299333 SS18L1O75177 396 aaPredicted RBP12.79□□□□□ -0.36
SCN3B-201ENST00000299333 SRFP11831 508 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 ASCL5Q7RTU5 278 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 FAM19A2Q8N3H0 131 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 TRBV20OR9-2A0A075B6H5 130 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 SLC25A10Q9UBX3 287 aaPredicted RBP12.79□□□□□ -0.36
SCN3B-201ENST00000299333 A8MXK9 166 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 ZNHIT1O43257 154 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 S1PR2O95136 353 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 BHLHA9Q7RTU4 235 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 AMELYQ99218 206 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 PLSCR2Q9NRY7 297 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 IGKV3OR2-268A0A0C4DH90 116 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 RPL31P62899 125 aaKnown RBP12.79□□□□□ -0.36
SCN3B-201ENST00000299333 EBLN2Q6P2I7 272 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 ZNF385AQ96PM9 386 aaKnown RBP12.79□□□□□ -0.36
SCN3B-201ENST00000299333 METTL26Q96S19 204 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 GEMIN7Q9H840 131 aaKnown RBP12.79□□□□□ -0.36
SCN3B-201ENST00000299333 LINC01565O15544 149 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 SOX8P57073 446 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 FGF12P61328 243 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 ZNF562Q6V9R5 426 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 POC1AQ8NBT0 407 aa12.79□□□□□ -0.36
SCN3B-201ENST00000299333 CD3EP07766 207 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 NR2C2APQ86WQ0 139 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 ESDP10768 282 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 GPR183P32249 361 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 DTX4Q9Y2E6 619 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 TNRC6CQ9HCJ0 1690 aaKnown RBP12.78□□□□□ -0.36
SCN3B-201ENST00000299333 DOCK2Q92608 1830 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 PPIAL4EA0A075B759 164 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 PPIAL4FP0DN26 164 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 FAM74A4Q5TZK3 123 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 PPIAL4AQ9Y536 164 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 IL11P20809 199 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 MDP1Q86V88 176 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 OR2K2Q8NGT1 345 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 TMEM56-RWDD3S4R434 201 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 ADAMTSL3P82987 1691 aa12.78□□□□□ -0.36
SCN3B-201ENST00000299333 RRHO14718 337 aa12.77□□□□□ -0.36
SCN3B-201ENST00000299333 OR2H2O95918 312 aa12.77□□□□□ -0.36
SCN3B-201ENST00000299333 IGHV4-39P01824 125 aa12.77□□□□□ -0.36
SCN3B-201ENST00000299333 APOHP02749 345 aaPredicted RBP12.77□□□□□ -0.36
SCN3B-201ENST00000299333 ZP1P60852 638 aa12.77□□□□□ -0.36
SCN3B-201ENST00000299333 COX14Q96I36 57 aa12.77□□□□□ -0.36
SCN3B-201ENST00000299333 BTAF1O14981 1849 aa12.77□□□□□ -0.36
SCN3B-201ENST00000299333 ATXN7O15265 892 aaPredicted RBP12.77□□□□□ -0.36
SCN3B-201ENST00000299333 SRSF6Q13247 344 aaKnown RBP12.77□□□□□ -0.36
SCN3B-201ENST00000299333 CEACAM21Q3KPI0 293 aa12.77□□□□□ -0.36
SCN3B-201ENST00000299333 CD200R1LQ6Q8B3 271 aa12.77□□□□□ -0.36
SCN3B-201ENST00000299333 KCNMB2Q9Y691 235 aa12.77□□□□□ -0.36
SCN3B-201ENST00000299333 TRAV12-3A0A0B4J271 114 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 A0A0U1RQV5 110 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 KLK10O43240 276 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 ZNF708P17019 499 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 RPL8P62917 257 aaKnown RBP12.77□□□□□ -0.37
SCN3B-201ENST00000299333 TMEM240Q5SV17 173 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 CCL3P10147 92 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 GCHFRP30047 84 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 OCIAD2Q56VL3 154 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 GOLT1AQ6ZVE7 132 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 NHP2Q9NX24 153 aaKnown RBP12.77□□□□□ -0.37
SCN3B-201ENST00000299333 IGHV3OR16-12A0A075B7B8 117 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 VENTXO95231 258 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 BOD1L2Q8IYS8 172 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 FBLIM1Q8WUP2 373 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 C1orf43Q9BWL3 253 aa12.77□□□□□ -0.37
SCN3B-201ENST00000299333 TMEM187Q14656 261 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 SPEM1Q8N4L4 309 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 SELENOKQ9Y6D0 94 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 TTC3P53804 2025 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 GPR6P46095 362 aaPredicted RBP12.76□□□□□ -0.37
SCN3B-201ENST00000299333 TRA2AQ13595 282 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCN3B-201ENST00000299333 KIR2DL4Q99706 377 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 IL36BQ9NZH7 164 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 C2CD4DB7Z1M9 353 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 PIN1P1O15428 100 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 SPINK8P0C7L1 97 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 MFAP4P55083 255 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 P2RY6Q15077 328 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 TRAV8-1A0A0A6YYK1 113 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 TMEM250H0YL14 139 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 SLC25A53Q5H9E4 307 aa12.76□□□□□ -0.37
SCN3B-201ENST00000299333 ABHD12Q8N2K0 398 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms