RNA–Protein interactions for RNA: ENST00000292535.11

CUX1-201, Transcript of cut like homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CUX1, Length 13,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-201ENST00000292535 IGHV1-45A0A0A0MS14 117 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 ASAH2BP0C7U1 165 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 SEC11BP0C7V7 166 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 C9orf40Q8IXQ3 194 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 C19orf24Q9BVV8 132 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 C5orf67F2Z3F1 127 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 CCL8P80075 99 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 RHOVQ96L33 236 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 CCL13Q99616 98 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 CXorf65A6NEN9 183 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 HAX1O00165 279 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 ZNF721Q8TF20 911 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 FBLL1A6NHQ2 334 aaKnown RBP8.08□□□□□ -1.12
CUX1-201ENST00000292535 CTSSP25774 331 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 FAM74A4Q5TZK3 123 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 ZNF880Q6PDB4 577 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 EEF1AKMT3Q96AZ1 226 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 PSME4Q14997 1843 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 A0A1B0GTL3 188 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 TMEM262E9PQX1 116 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 CYB5R3P00387 301 aaPredicted RBP8.08□□□□□ -1.12
CUX1-201ENST00000292535 KIAA0040Q15053 153 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 FAM27BQ5VT28 67 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 METTL1Q9UBP6 276 aaKnown RBP8.08□□□□□ -1.12
CUX1-201ENST00000292535 HSF4Q9ULV5 492 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 UBR3Q6ZT12 1888 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 TMEM250H0YL14 139 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 DRD3P35462 400 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 HOGA1Q86XE5 327 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 H3BRM9 83 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 OR2H2O95918 312 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 MRPL32Q9BYC8 188 aaKnown RBP8.08□□□□□ -1.12
CUX1-201ENST00000292535 PEX11BO96011 259 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 SIGIRRQ6IA17 410 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 ARL6IP6Q8N6S5 226 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 MRPL24Q96A35 216 aaKnown RBP8.08□□□□□ -1.12
CUX1-201ENST00000292535 UQCR10Q9UDW1 63 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 DSCAMO60469 2012 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 HLA-DRB1P01911 266 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 CT62P0C5K7 136 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 EMP1P54849 157 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 MEF2BQ02080 365 aaPredicted RBP8.08□□□□□ -1.12
CUX1-201ENST00000292535 GCSAMLQ5JQS6 135 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 PARP14Q460N5 1801 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 TRPM3Q9HCF6 1732 aaPredicted RBP8.08□□□□□ -1.12
CUX1-201ENST00000292535 C7orf66A4D0T2 115 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 SYNGR3O43761 229 aa8.08□□□□□ -1.12
CUX1-201ENST00000292535 KCNAB3O43448 404 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 NPPCP23582 126 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 ATP6V0CP27449 155 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 LYZL2Q7Z4W2 148 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 PGLYRP4Q96LB8 373 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 PRR33A8MZF0 331 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 FOXH1O75593 365 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 FSTP19883 344 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 CYB561D1Q8N8Q1 229 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 FOXD3Q9UJU5 478 aaPredicted RBP8.07□□□□□ -1.12
CUX1-201ENST00000292535 TSPAN13O95857 204 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 BGLAPP02818 100 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 ANOS1P23352 680 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 KLRB1Q12918 225 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 TCF23Q7RTU1 214 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 TUBD1Q9UJT1 453 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 ASPDHA6ND91 283 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 STPG1Q5TH74 334 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 C10orf126Q8N4M7 172 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 BEND2Q8NDZ0 799 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 VN1R17PQ8TDU5 208 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 WBP1LQ9NX94 342 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 CCL4P13236 92 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 ZNF25P17030 456 aaPredicted RBP8.07□□□□□ -1.12
CUX1-201ENST00000292535 FXYD3Q14802 87 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 OR9G1Q8NH87 305 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 FAM216AQ8WUB2 273 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 OPN3Q9H1Y3 402 aaPredicted RBP8.07□□□□□ -1.12
CUX1-201ENST00000292535 PGPEP1Q9NXJ5 209 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 JKAMPQ9P055 326 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 PIEZO2Q9H5I5 2752 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 CGB1A6NKQ9 187 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 PRR13Q9NZ81 148 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 TNFSF18Q9UNG2 199 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 PCSK4Q6UW60 755 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 PPIAL4CA0A0B4J2A2 164 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 PPIAL4GP0DN37 164 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 PMS2CLQ68D20 193 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 LHX8Q68G74 356 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 CENPVQ7Z7K6 275 aaPredicted RBP8.07□□□□□ -1.12
CUX1-201ENST00000292535 ALG14Q96F25 216 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 TMSB15BA0A087X1C1 80 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 GPR82Q96P67 336 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 FAM60AQ9NP50 221 aa8.07□□□□□ -1.12
CUX1-201ENST00000292535 RALGAPA2Q2PPJ7 1873 aa8.06□□□□□ -1.12
CUX1-201ENST00000292535 ZNF729A6NN14 1252 aaPredicted RBP8.06□□□□□ -1.12
CUX1-201ENST00000292535 MPV17P39210 176 aa8.06□□□□□ -1.12
CUX1-201ENST00000292535 UCN2Q96RP3 112 aa8.06□□□□□ -1.12
CUX1-201ENST00000292535 PXMP4Q9Y6I8 212 aa8.06□□□□□ -1.12
CUX1-201ENST00000292535 LHFPL5Q8TAF8 219 aa8.06□□□□□ -1.12
CUX1-201ENST00000292535 CCL27Q9Y4X3 112 aa8.06□□□□□ -1.12
CUX1-201ENST00000292535 FAM90A10PA6NDY2 464 aa8.06□□□□□ -1.12
CUX1-201ENST00000292535 FAM90A18PA6NE21 464 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms