RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 TGIF1Q15583 401 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 MIC13Q5XKP0 118 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 SPSB4Q96A44 273 aa10.92□□□□□ -0.66
PTCD1-201ENST00000292478 LOC102723996A0A087X1L8 192 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.91□□□□□ -0.66
PTCD1-201ENST00000292478 TRAV34A0A0B4J273 112 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 LOXL3P58215 753 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 TMEM78Q5T7P6 136 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 DNM1P46Q6ZS02 220 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 FAM90A1Q86YD7 464 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 ZNF383Q8NA42 475 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 RBM14Q96PK6 669 aaKnown RBP10.91□□□□□ -0.66
PTCD1-201ENST00000292478 GGACTQ9BVM4 153 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 FBLN5Q9UBX5 448 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 PPIAL4CA0A0B4J2A2 164 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 PPIAL4GP0DN37 164 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 A6NDN8 102 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 TM4SF5O14894 197 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 ZG16O60844 167 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 SLC35B1P78383 322 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 ABHD12Q8N2K0 398 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 FLVCR1-AS1Q8TAF5 88 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 DYNLRB2Q8TF09 96 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 SOSTQ9BQB4 213 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 GLIPR1P48060 266 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 SPANXN1Q5VSR9 72 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 RABAC1Q9UI14 185 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 DNAJC13O75165 2243 aa10.91□□□□□ -0.66
PTCD1-201ENST00000292478 MPTX1A8MV57 137 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 C1QL1O75973 258 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 RFPL3SP0C7P2 107 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 APELAP0DMC3 54 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 CLEC7AQ9BXN2 247 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 HILPDAQ9Y5L2 63 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 ZFP30Q9Y2G7 519 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 IGHV3-21A0A0B4J1V1 117 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 F12P00748 615 aaPredicted RBP10.9□□□□□ -0.66
PTCD1-201ENST00000292478 GCGP01275 180 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 CD99P14209 185 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 KIR2DL2P43627 348 aaPredicted RBP10.9□□□□□ -0.66
PTCD1-201ENST00000292478 RND2P52198 227 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 DHRS11Q6UWP2 260 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 ACP7Q6ZNF0 438 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 OR10J6PQ8NGY7 276 aa10.9□□□□□ -0.66
PTCD1-201ENST00000292478 A0A0G2JMZ2 1700 aa10.9□□□□□ -0.67
PTCD1-201ENST00000292478 LRRC37A2A6NM11 1700 aa10.9□□□□□ -0.67
PTCD1-201ENST00000292478 LIPFP07098 398 aa10.9□□□□□ -0.67
PTCD1-201ENST00000292478 GFRA1P56159 465 aa10.9□□□□□ -0.67
PTCD1-201ENST00000292478 RALYQ9UKM9 306 aaKnown RBP10.9□□□□□ -0.67
PTCD1-201ENST00000292478 TRBV9A0A0B4J1U6 114 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 IGHV1-69-2A0A0G2JMI3 117 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 LNP1A1A4G5 178 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 PGPA6NDG6 321 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 WNT9BO14905 357 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 RAMP1O60894 148 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 MEGF10Q96KG7 1140 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 SIGLEC12Q96PQ1 595 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 PIMREGQ9BSJ6 248 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 LCTP09848 1927 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 OR51G1Q8NGK1 321 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 TP53RKQ96S44 253 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 ATG101Q9BSB4 218 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 REPIN1Q9BWE0 567 aaKnown RBP10.89□□□□□ -0.67
PTCD1-201ENST00000292478 AURKAIP1Q9NWT8 199 aaPredicted RBP10.89□□□□□ -0.67
PTCD1-201ENST00000292478 IGKV1D-43A0A0B4J1Z2 117 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 SLC25A17O43808 307 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 LYPD3O95274 346 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 MGPP08493 103 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 UCP1P25874 307 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 OR51M1Q9H341 326 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 TMEM250H0YL14 139 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 AREGP15514 252 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 ABLIM2Q6H8Q1 611 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 HCP5Q6MZN7 132 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 FDCSPQ8NFU4 85 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 GATAD1Q8WUU5 269 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 HSPB7Q9UBY9 170 aa10.89□□□□□ -0.67
PTCD1-201ENST00000292478 DOCK3Q8IZD9 2030 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 A0A1B0GTI1 187 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 RHBDL1O75783 438 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 AMY1AP04745 511 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 SCGB1D4Q6XE38 83 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 MRPL13Q9BYD1 178 aaKnown RBP10.88□□□□□ -0.67
PTCD1-201ENST00000292478 ZNF98A6NK75 572 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 C17orf51A8MQB3 221 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 KLF7O75840 302 aaPredicted RBP10.88□□□□□ -0.67
PTCD1-201ENST00000292478 COX6B1P14854 86 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 APOBEC3AP31941 199 aaPredicted RBP10.88□□□□□ -0.67
PTCD1-201ENST00000292478 ZNF506Q5JVG8 444 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 EBLN2Q6P2I7 272 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 TLNRD1Q9H1K6 362 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 LOC105371242A0A075B767 164 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 IGHV3-72A0A0B4J1Y9 119 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 KLRB1Q12918 225 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 UNQ5815/PRO19632Q6UWF5 114 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 OSR1Q8TAX0 266 aaPredicted RBP10.88□□□□□ -0.67
PTCD1-201ENST00000292478 TRBV23-1A0A0A0MS06 115 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 CBY3A6NI87 242 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 ZNF137PP52743 207 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms