RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MSRB2Q9Y3D2 182 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 F5H697 171 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 RGS13O14921 159 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 TGOLN2O43493 480 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 CD74P04233 296 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 FAM157CP0CG43 387 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 TIMP3P35625 211 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 SLC35B1P78383 322 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 C16orf82Q7Z2V1 217 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 OR13A1Q8NGR1 328 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 POM121Q96HA1 1249 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 SSBP3Q9BWW4 388 aaPredicted RBP11.62□□□□□ -0.55
NPC1-201ENST00000269228 TM2D1Q9BX74 207 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 CLDN34H7C241 214 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 PITX3O75364 302 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 TMEM30BQ3MIR4 351 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 OR10S1Q8NGN2 331 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 DEDDO75618 318 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 HSPE1P61604 102 aaKnown RBP11.62□□□□□ -0.55
NPC1-201ENST00000269228 LYZL4Q96KX0 146 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 ZNF407Q9C0G0 2248 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 HYPMO75409 117 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 HTN1P15515 57 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 FAM216AQ8WUB2 273 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 EAF1Q96JC9 268 aaPredicted RBP11.61□□□□□ -0.55
NPC1-201ENST00000269228 SOSTQ9BQB4 213 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 HIGD1AQ9Y241 93 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 PQLC2LA1A4F0 135 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 USF1P22415 310 aaPredicted RBP11.61□□□□□ -0.55
NPC1-201ENST00000269228 KIR2DL2P43627 348 aaPredicted RBP11.61□□□□□ -0.55
NPC1-201ENST00000269228 GAS1P54826 345 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 OR1L6Q8NGR2 347 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 CTXND1A0A1B0GTU2 59 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 SEC11BP0C7V7 166 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 GALR1P47211 349 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 OR52M1Q8NGK5 317 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 OR4A5Q8NH83 315 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 CHAC2Q8WUX2 184 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 ZNF345Q14585 488 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 STXBP6Q8NFX7 210 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 RSG1Q9BU20 258 aa11.61□□□□□ -0.55
NPC1-201ENST00000269228 LYNX1G3V0Z9 82 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 PHOX2AO14813 284 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 REG1AP05451 166 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 LYNX1P0DP58 116 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 MEOX2P50222 304 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 MS4A10Q96PG2 267 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 EP400Q96L91 3159 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 OR2J3O76001 311 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 IGFBP3P17936 291 aaPredicted RBP11.6□□□□□ -0.55
NPC1-201ENST00000269228 RND2P52198 227 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 PAFAH1B2P68402 229 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 PLA2G2CQ5R387 149 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 PLSCR4Q9NRQ2 329 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 PXMP4Q9Y6I8 212 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 HAX1O00165 279 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 SIGLECL1Q8N7X8 197 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 NAT8BQ9UHF3 227 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 VAX2Q9UIW0 290 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 IGKV1-9A0A0C4DH69 117 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 PCNX2A6NKB5 2137 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 KBTBD11O94819 623 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 MMP9P14780 707 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 PPOXP50336 477 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 UCP3P55916 312 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 RANP62826 216 aaKnown RBP11.6□□□□□ -0.55
NPC1-201ENST00000269228 TMEM37Q8WXS4 190 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 TRAPPC1Q9Y5R8 145 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 DOCK9Q9BZ29 2069 aa11.6□□□□□ -0.55
NPC1-201ENST00000269228 HEATR1Q9H583 2144 aaKnown RBP11.6□□□□□ -0.55
NPC1-201ENST00000269228 CORTO00230 105 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 CXorf1O96002 111 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 BSXQ3C1V8 233 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 KHDC3LQ587J8 217 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 QTRT1Q9BXR0 403 aaKnown RBP11.59□□□□□ -0.55
NPC1-201ENST00000269228 TCF19Q9Y242 345 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 PLAUP00749 431 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 LINC00869P0C866 280 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 PGA5P0DJD9 388 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 Q6ZS92 163 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 RBM14Q96PK6 669 aaKnown RBP11.59□□□□□ -0.55
NPC1-201ENST00000269228 FRMPD3Q5JV73 1810 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 CXCL2P19875 107 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 CAMPP49913 170 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 TNFRSF9Q07011 255 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 TP53RKQ96S44 253 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 CBLN4Q9NTU7 201 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 PROB1E7EW31 1015 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 TFPI2P48307 235 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 DNM1P46Q6ZS02 220 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 VPS25Q9BRG1 176 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 FER1L5A0AVI2 2057 aa11.59□□□□□ -0.55
NPC1-201ENST00000269228 TMEM187Q14656 261 aa11.58□□□□□ -0.55
NPC1-201ENST00000269228 PAXXQ9BUH6 204 aa11.58□□□□□ -0.55
NPC1-201ENST00000269228 TFF1P04155 84 aa11.58□□□□□ -0.56
NPC1-201ENST00000269228 GNLYP22749 145 aa11.58□□□□□ -0.56
NPC1-201ENST00000269228 OR2T10Q8NGZ9 312 aa11.58□□□□□ -0.56
NPC1-201ENST00000269228 TMEM204Q9BSN7 226 aa11.58□□□□□ -0.56
NPC1-201ENST00000269228 DPM3Q9P2X0 92 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms