RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 B4E171 279 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 K7ERU9 68 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 SLC17A3O00476 420 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 CLEC3BP05452 202 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 ADH4P08319 380 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 ARL14EPLP0DKL9 152 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 APELAP0DMC3 54 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 TSPAN7P41732 249 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 COX19Q49B96 90 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 OR1L1Q8NH94 360 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 FLYWCH2Q96CP2 140 aaKnown RBP9.87□□□□□ -0.83
VPS33A-201ENST00000267199 C14orf144Q96I85 54 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 FER1L5A0AVI2 2057 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 RFPL3SP0C7P2 107 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 TNFSF10P50591 281 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 OR1B1Q8NGR6 318 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 ZNF407Q9C0G0 2248 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 LOC390937A0A1W2PQ73 354 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 SP1P08047 785 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 TNFRSF9Q07011 255 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 SPEM2Q0P670 501 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 CALHM1Q8IU99 346 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 SGK494Q96LW2 274 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 QTRT1Q9BXR0 403 aaKnown RBP9.87□□□□□ -0.83
VPS33A-201ENST00000267199 HES7Q9BYE0 225 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 DLL3Q9NYJ7 618 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 IL19Q9UHD0 177 aa9.87□□□□□ -0.83
VPS33A-201ENST00000267199 PKDREJQ9NTG1 2253 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 IFITM10A6NMD0 228 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 A6NNC1 897 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 PROB1E7EW31 1015 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 PLAUP00749 431 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 S100A7P31151 101 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 UCP3P55916 312 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 LEMD1Q68G75 181 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 OR8A1Q8NGG7 326 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 TMEM54Q969K7 222 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 DOCK11Q5JSL3 2073 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 C21orf140B9A014 251 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 TMEM250H0YL14 139 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 COL8A1P27658 744 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 TFPI2P48307 235 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 ZNF826PQ6ZT77 177 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 PDPNQ86YL7 162 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 TMEM56Q96MV1 263 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 TM2D1Q9BX74 207 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 MAP1LC3CQ9BXW4 147 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 PPP1R14DQ9NXH3 145 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 TRBV6-7A0A0A0MS04 114 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 IBA57Q5T440 356 aaKnown RBP9.86□□□□□ -0.83
VPS33A-201ENST00000267199 TCF23Q7RTU1 214 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 ZNF441Q8N8Z8 693 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 PILRBQ9UKJ0 227 aa9.86□□□□□ -0.83
VPS33A-201ENST00000267199 OR2H2O95918 312 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 P01737 135 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 HBZP02008 142 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 CRYBB3P26998 211 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 JOSD1Q15040 202 aaPredicted RBP9.85□□□□□ -0.83
VPS33A-201ENST00000267199 MMD2Q8IY49 270 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 SFRP2Q96HF1 295 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 SSBP3Q9BWW4 388 aaPredicted RBP9.85□□□□□ -0.83
VPS33A-201ENST00000267199 OPN3Q9H1Y3 402 aaPredicted RBP9.85□□□□□ -0.83
VPS33A-201ENST00000267199 GNB4Q9HAV0 340 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 TMEM140Q9NV12 185 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 EFNA2O43921 213 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 S1PR2O95136 353 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 KCNMB1Q16558 191 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 MUC15Q8N387 334 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 OR51G1Q8NGK1 321 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 OR2T6Q8NHC8 308 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 NPVFQ9HCQ7 196 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 FBLN5Q9UBX5 448 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 PCNX1Q96RV3 2341 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 IGLV3-12A0A075B6K2 115 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 SMPD2O60906 423 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 RPL23P62829 140 aaKnown RBP9.85□□□□□ -0.83
VPS33A-201ENST00000267199 DOLPP1Q86YN1 238 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 BPIFA4PQ86YQ2 179 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 DOPEY2Q9Y3R5 2298 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 IGHV3-21A0A0B4J1V1 117 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 PGPEP1LA6NFU8 196 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 AMBPP02760 352 aa9.85□□□□□ -0.83
VPS33A-201ENST00000267199 RPL11P62913 178 aaKnown RBP9.85□□□□□ -0.83
VPS33A-201ENST00000267199 TMSB15BA0A087X1C1 80 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A10PA6NDY2 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A18PA6NE21 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A16PA6NEW6 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A20PA6NIJ5 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A8PA6NJQ4 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A7PA6NKC0 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A22PA8MWA6 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A12PA8MX19 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A5PA8MXJ8 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A23PA8MXZ1 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A15PP0C7V4 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A13PP0C7W8 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A14PP0C7W9 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 FAM90A24PP0C7X0 464 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 ATP5G3P48201 142 aa9.84□□□□□ -0.83
VPS33A-201ENST00000267199 COMPP49747 757 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms