RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TAS2R45P59539 299 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 OR2A7Q96R45 310 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 ATP5SQ99766 215 aa12.1□□□□□ -0.47
PDLIM2-201ENST00000265810 COX7A2P2O60397 106 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 CGAP01215 116 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 PXDC1Q5TGL8 231 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 SEM1Q6ZVN7 128 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 EML5Q05BV3 1969 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 S100A9P06702 114 aaKnown RBP12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 MIDNQ504T8 468 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 IGHV3OR16-10A0A075B7F0 116 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 TMEM178BH3BS89 294 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 SOX15O60248 233 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 NAPSAO96009 420 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 BPIFB3P59826 476 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 Q56UQ5 140 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 RXFP4Q8TDU9 374 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 CHD8Q9HCK8 2581 aa12.09□□□□□ -0.47
PDLIM2-201ENST00000265810 C17orf98A8MV24 154 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 MPTX1A8MV57 137 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 IGLV3-1P01715 115 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 Q8NA96 180 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 PHYHIPLQ96FC7 376 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 NIPSNAP3BQ9BS92 247 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 CEACAM18A8MTB9 384 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 ANOS1P23352 680 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 ETFRF1Q6IPR1 90 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 Q6P435 159 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 IL22RA2Q969J5 263 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 MED9Q9NWA0 146 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 UCP1P25874 307 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 CFPP27918 469 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 HOXA4Q00056 320 aaPredicted RBP12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 THYN1Q9P016 225 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 UQCRFS1P47985 274 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 RPL8P62917 257 aaKnown RBP12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 ZNF345Q14585 488 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 BIVMQ86UB2 503 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 CMTM2Q8TAZ6 248 aa12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 METTL1Q9UBP6 276 aaKnown RBP12.08□□□□□ -0.48
PDLIM2-201ENST00000265810 UBE2G2P60604 165 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 BTN1A1Q13410 526 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 MORN2Q502X0 79 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 BTNL8Q6UX41 500 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 OR4F5Q8NH21 305 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 OR4F4Q96R69 305 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 TLNRD1Q9H1K6 362 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 UNC80Q8N2C7 3258 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 SPCS3P61009 180 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 OR4C13Q8NGP0 309 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 ANGPTL6Q8NI99 470 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 RBKSQ9H477 322 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 IGKV1D-17A0A075B6S4 117 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 F6UZH7 168 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 RPL27AP46776 148 aaKnown RBP12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 RND3P61587 244 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 SSMEM1Q8WWF3 244 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 C20orf24Q9BUV8 137 aa12.07□□□□□ -0.48
PDLIM2-201ENST00000265810 NUDT19A8MXV4 375 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 GRNP28799 593 aaKnown RBP12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 WDR86Q86TI4 376 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 COA4Q9NYJ1 87 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 LSM10Q969L4 123 aaKnown RBP12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 SLC25A22Q9H936 323 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 DOK5Q9P104 306 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 IGHV3-21A0A0B4J1V1 117 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 YPEL1O60688 119 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 ZNF324BQ6AW86 544 aaPredicted RBP12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 SLC24A4Q8NFF2 622 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 YPEL2Q96QA6 119 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 HTD2P86397 168 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 TNFRSF9Q07011 255 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 C3orf36Q3SXR2 165 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 A0A0C4DFX4 3053 aa12.06□□□□□ -0.48
PDLIM2-201ENST00000265810 FAM106CPP0CH98 169 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 COL8A2P25067 703 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 RAB4BP61018 213 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 LHFPL1Q86WI0 220 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 OR10G4Q8NGN3 311 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 OR10G9Q8NGN4 311 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 OR10G7Q8NGN6 311 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 LGALS7P47929 136 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 TDGF1P3P51864 188 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 HMGN3Q15651 99 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 ADIRFQ15847 76 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 HSPE1P61604 102 aaKnown RBP12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 DHRS7BQ6IAN0 325 aaPredicted RBP12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 C20orf204Q6ZNR8 217 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 MMD2Q8IY49 270 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 RPUSD4Q96CM3 377 aaKnown RBP12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 COQ2Q96H96 371 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 CDH23Q9H251 3354 aa12.05□□□□□ -0.48
PDLIM2-201ENST00000265810 ATP6V0CP27449 155 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 RUNX1Q01196 453 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 ECSCRQ19T08 205 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 HCP5Q6MZN7 132 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 DCAF16Q9NXF7 216 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 PPP1R14DQ9NXH3 145 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 DPM3Q9P2X0 92 aa12.04□□□□□ -0.48
PDLIM2-201ENST00000265810 MAP1LC3B2A6NCE7 125 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms