RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 SOSTQ9BQB4 213 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 A0A087WV48 116 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 A0A087X0M5 115 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 A0A1B0GX30 115 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 USF1P22415 310 aaPredicted RBP11.92□□□□□ -0.5
CDH3-201ENST00000264012 AMTP48728 403 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 LAMTOR1Q6IAA8 161 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 LSM10Q969L4 123 aaKnown RBP11.92□□□□□ -0.5
CDH3-201ENST00000264012 ABHD17AQ96GS6 310 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 MEGF10Q96KG7 1140 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 HIGD1AQ9Y241 93 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 PPIAL4CA0A0B4J2A2 164 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 ZG16O60844 167 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 ZNF253O75346 499 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 PPIAL4GP0DN37 164 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 CCKARP32238 428 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 MRPL54Q6P161 138 aaKnown RBP11.91□□□□□ -0.5
CDH3-201ENST00000264012 LDLRAD3Q86YD5 345 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 PARD6AQ9NPB6 346 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 LINC00869P0C866 280 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 KLRB1Q12918 225 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 ARTNQ5T4W7 220 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 CACNA1HO95180 2353 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 IGHV1-69-2A0A0G2JMI3 117 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 PTBP3O95758 552 aaKnown RBP11.91□□□□□ -0.5
CDH3-201ENST00000264012 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
CDH3-201ENST00000264012 IGHV1-2P23083 117 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 SELENOTP62341 195 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 MUC15Q8N387 334 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 TMEM208Q9BTX3 173 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 PRO1933Q9H354 126 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 J3QRE1 110 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 PSG7Q13046 419 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 ACSF3Q4G176 576 aaPredicted RBP11.91□□□□□ -0.5
CDH3-201ENST00000264012 ABHD12Q8N2K0 398 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 OR9G1Q8NH87 305 aa11.91□□□□□ -0.5
CDH3-201ENST00000264012 C16orf82Q7Z2V1 217 aa11.9□□□□□ -0.5
CDH3-201ENST00000264012 LINC01560Q8TB33 94 aa11.9□□□□□ -0.5
CDH3-201ENST00000264012 ARF6P62330 175 aa11.9□□□□□ -0.5
CDH3-201ENST00000264012 MIC13Q5XKP0 118 aa11.9□□□□□ -0.5
CDH3-201ENST00000264012 ACP7Q6ZNF0 438 aa11.9□□□□□ -0.5
CDH3-201ENST00000264012 B9A039 149 aa11.9□□□□□ -0.5
CDH3-201ENST00000264012 CD8AP01732 235 aa11.9□□□□□ -0.5
CDH3-201ENST00000264012 ORM1P02763 201 aa11.9□□□□□ -0.5
CDH3-201ENST00000264012 TCF19Q9Y242 345 aa11.9□□□□□ -0.5
CDH3-201ENST00000264012 SPTAN1Q13813 2472 aaKnown RBP11.9□□□□□ -0.5
CDH3-201ENST00000264012 IGHV2OR16-5A0A0B4J2B6 119 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 LOC105371267A0A1B0GV96 52 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 C12orf77C9JDV5 145 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 CORTO00230 105 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 CSN3P07498 182 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 CD59P13987 128 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 CD40P25942 277 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 EFNB1P98172 346 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 MEF2BQ02080 365 aaPredicted RBP11.9□□□□□ -0.51
CDH3-201ENST00000264012 TMEM30BQ3MIR4 351 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 C9orf106Q8NAJ2 232 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 OR1L6Q8NGR2 347 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 P2RX4Q99571 388 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 FUT9Q9Y231 359 aa11.9□□□□□ -0.51
CDH3-201ENST00000264012 DLL1O00548 723 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 FAM87AP0C7U9 286 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 FAM106CPP0CH98 169 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 ZP1P60852 638 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 IL36RNQ9UBH0 155 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 M0R143 59 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 PKIAP61925 76 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 VKORC1L1Q8N0U8 176 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 WDR31Q8NA23 367 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 PACRGQ96M98 296 aaPredicted RBP11.89□□□□□ -0.51
CDH3-201ENST00000264012 PITPNC1Q9UKF7 332 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 UFC1Q9Y3C8 167 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 ZSWIM8A7E2V4 1837 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 RND2P52198 227 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 CELA3BP08861 270 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 HIST1H1EP10412 219 aaKnown RBP11.89□□□□□ -0.51
CDH3-201ENST00000264012 COX6B1P14854 86 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 TMEM183BQ1AE95 376 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 FAM57AQ8TBR7 257 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 FAM131CQ96AQ9 280 aa11.89□□□□□ -0.51
CDH3-201ENST00000264012 A0A0B4J293 547 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 ZNF716A6NP11 495 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 GAS1P54826 345 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 OR4C13Q8NGP0 309 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 EFNA2O43921 213 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 KBTBD11O94819 623 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 NDUFB4O95168 129 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 HSPB1P04792 205 aaKnown RBP11.88□□□□□ -0.51
CDH3-201ENST00000264012 OR5AL1P0C617 328 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 CSRP1P21291 193 aaKnown RBP11.88□□□□□ -0.51
CDH3-201ENST00000264012 HNRNPA3P51991 378 aaKnown RBP11.88□□□□□ -0.51
CDH3-201ENST00000264012 NHLH1Q02575 133 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 TMEM186Q96B77 213 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 SMIM8Q96KF7 97 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 POLEQ07864 2286 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 J3KRW8 73 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 SIGLEC5O15389 551 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 PLAUP00749 431 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 IER3P46695 156 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms