RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 C11orf53Q8IXP5 236 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 ADTRPQ96IZ2 230 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 RHOVQ96L33 236 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 SLC35D1Q9NTN3 355 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 RPL31P62899 125 aaKnown RBP13.12□□□□□ -0.31
RFX1-201ENST00000254325 ZCCHC24Q8N2G6 241 aaKnown RBP13.12□□□□□ -0.31
RFX1-201ENST00000254325 ZNF561Q8N587 486 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 PFDN5Q99471 154 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 QTRT1Q9BXR0 403 aaKnown RBP13.12□□□□□ -0.31
RFX1-201ENST00000254325 IGKV1D-17A0A075B6S4 117 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 MT-CO2P00403 227 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 ACAA1P09110 424 aaPredicted RBP13.12□□□□□ -0.31
RFX1-201ENST00000254325 UBE2G2P60604 165 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 SLC25A10Q9UBX3 287 aaPredicted RBP13.12□□□□□ -0.31
RFX1-201ENST00000254325 IL19Q9UHD0 177 aa13.12□□□□□ -0.31
RFX1-201ENST00000254325 CEACAM4O75871 244 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 THBS3P49746 956 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 DLK1P80370 383 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 HTD2P86397 168 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 PLEKHA3Q9HB20 300 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 KCNIP2Q9NS61 270 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 BCL2P10415 239 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 PAX9P55771 341 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 LRRC75BQ2VPJ9 315 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 MORN2Q502X0 79 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 COMMD5Q9GZQ3 224 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 USF3Q68DE3 2245 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 LY86O95711 162 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 MRGPRGQ86SM5 289 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 FAM169BQ8N8A8 192 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 HES4Q9HCC6 221 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 PLA2G2EQ9NZK7 142 aa13.11□□□□□ -0.31
RFX1-201ENST00000254325 PPIAL4EA0A075B759 164 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 PPIAL4DF5H284 164 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 CD55P08174 381 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 FAM87AP0C7U9 286 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 PPIAL4FP0DN26 164 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 CDC34P49427 236 aaPredicted RBP13.1□□□□□ -0.31
RFX1-201ENST00000254325 IGF2-ASQ6U949 168 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 PSMG3Q9BT73 122 aaPredicted RBP13.1□□□□□ -0.31
RFX1-201ENST00000254325 TMEM140Q9NV12 185 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 VAX2Q9UIW0 290 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 RNF115Q9Y4L5 304 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 PPIAL4AQ9Y536 164 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 HSPB1P04792 205 aaKnown RBP13.1□□□□□ -0.31
RFX1-201ENST00000254325 SPCS3P61009 180 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 BSPH1Q075Z2 132 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 RCC1LQ96I51 464 aaKnown RBP13.1□□□□□ -0.31
RFX1-201ENST00000254325 MYO15AQ9UKN7 3530 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 IGHV1-46P01743 117 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 DOLPP1Q86YN1 238 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 SPACA3Q8IXA5 215 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 LRFN3Q9BTN0 628 aa13.1□□□□□ -0.31
RFX1-201ENST00000254325 CGAP01215 116 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 KIAA0141Q14154 515 aaPredicted RBP13.09□□□□□ -0.31
RFX1-201ENST00000254325 CD3EP07766 207 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 SEM1Q6ZVN7 128 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 COA4Q9NYJ1 87 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 ELOVL5Q9NYP7 299 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 IDI2-AS1Q9NZ38 188 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 ARHGAP21Q5T5U3 1957 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 LINC00473A8K010 186 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 CD1BP29016 333 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 HSPB7Q9UBY9 170 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 COL6A3P12111 3177 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 CTXND1A0A1B0GTU2 59 aa13.09□□□□□ -0.31
RFX1-201ENST00000254325 SNRPEP62304 92 aaKnown RBP13.09□□□□□ -0.31
RFX1-201ENST00000254325 YPEL1O60688 119 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 DUTP33316 252 aaKnown RBP13.08□□□□□ -0.32
RFX1-201ENST00000254325 YPEL2Q96QA6 119 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 DIRC2Q96SL1 478 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 GCM1Q9NP62 436 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 A0A0U1RQK1 487 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 RAB5AP20339 215 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 ARL16Q0P5N6 197 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 GUSBP1Q15486 140 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 A0A0G2JNJ9 132 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 KBTBD11-OT1A0A1B0GTJ5 212 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 REG1BP48304 166 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 NECAP1Q8NC96 275 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 NANPQ8TBE9 248 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 SSMEM1Q8WWF3 244 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 MS4A5Q9H3V2 200 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 VSIRQ9H7M9 311 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 Q9UFV3 132 aa13.08□□□□□ -0.32
RFX1-201ENST00000254325 SRP19P09132 144 aaKnown RBP13.07□□□□□ -0.32
RFX1-201ENST00000254325 IL3RAP26951 378 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 HFEQ30201 348 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 ZNF506Q5JVG8 444 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 ABHD12Q8N2K0 398 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 PATZ1Q9HBE1 687 aaKnown RBP13.07□□□□□ -0.32
RFX1-201ENST00000254325 NIT2Q9NQR4 276 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 USP34Q70CQ2 3546 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 SOX15O60248 233 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 PLGLAQ15195 96 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 C12orf57Q99622 126 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 TNRC6AQ8NDV7 1962 aaKnown RBP13.07□□□□□ -0.32
RFX1-201ENST00000254325 H7BYZ3 331 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 NPY1RP25929 384 aa13.07□□□□□ -0.32
RFX1-201ENST00000254325 NDUFA6P56556 154 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms