RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 H3BQ15 152 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 CDS2O95674 445 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 HSPB1P04792 205 aaKnown RBP11.45□□□□□ -0.58
NEK9-201ENST00000238616 ARL14EPLP0DKL9 152 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 RPL8P62917 257 aaKnown RBP11.45□□□□□ -0.58
NEK9-201ENST00000238616 LINC00596Q86U02 117 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 NPVFQ9HCQ7 196 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 PPIAL4CA0A0B4J2A2 164 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 CDC42EP2O14613 210 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 SLC25A20O43772 301 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 NDUFB4O95168 129 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 CTSDP07339 412 aaPredicted RBP11.45□□□□□ -0.58
NEK9-201ENST00000238616 PPIAL4GP0DN37 164 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 RCC1P18754 421 aaPredicted RBP11.45□□□□□ -0.58
NEK9-201ENST00000238616 LTBRP36941 435 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 C11orf44Q8N8P7 122 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 TMEM70Q9BUB7 260 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 SCNM1Q9BWG6 230 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 CYB5R1Q9UHQ9 305 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 NKX2-8O15522 239 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 CELA2AP08217 269 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 LSM6P62312 80 aaKnown RBP11.45□□□□□ -0.58
NEK9-201ENST00000238616 ZNF826PQ6ZT77 177 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 MRPL30Q8TCC3 161 aaKnown RBP11.45□□□□□ -0.58
NEK9-201ENST00000238616 CTGFP29279 349 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 OR4C45A6NMZ5 311 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 M0R381 172 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 IGF2P01344 180 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 ITLN1Q8WWA0 313 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 C18orf15Q96N68 181 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 TLNRD1Q9H1K6 362 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 IFT22Q9H7X7 185 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 RND2P52198 227 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 CD69Q07108 199 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 IGSF11Q5DX21 431 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 SRSF12Q8WXF0 261 aaKnown RBP11.45□□□□□ -0.58
NEK9-201ENST00000238616 EEF1AKMT3Q96AZ1 226 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 GPHA2Q96T91 129 aa11.45□□□□□ -0.58
NEK9-201ENST00000238616 PHLDA1Q8WV24 401 aaPredicted RBP11.44□□□□□ -0.58
NEK9-201ENST00000238616 EWSR1Q01844 656 aaKnown RBP eCLIP11.44□□□□□ -0.58
NEK9-201ENST00000238616 GTSCR1Q86UQ5 136 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 LINC01587Q99440 93 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 KCNE1BA0A087WTH5 132 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 ALG14Q96F25 216 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 MRM2Q9UI43 246 aaKnown RBP11.44□□□□□ -0.58
NEK9-201ENST00000238616 NRXN3Q9Y4C0 1643 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 GAB4Q2WGN9 574 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 NSUN5P1Q3KNT7 163 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 FAM89BQ8N5H3 189 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 HSPB9Q9BQS6 159 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 TRGV3P03979 118 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 LBHQ53QV2 105 aaPredicted RBP11.44□□□□□ -0.58
NEK9-201ENST00000238616 FOXB2Q5VYV0 432 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 NEU3Q9UQ49 428 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 PGPA6NDG6 321 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 ZNF688P0C7X2 276 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 PRELID3AQ96N28 172 aa11.44□□□□□ -0.58
NEK9-201ENST00000238616 ZNF506Q5JVG8 444 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 LINC01560Q8TB33 94 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 MRPL24Q96A35 216 aaKnown RBP11.43□□□□□ -0.58
NEK9-201ENST00000238616 MIOXQ9UGB7 285 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 MESTQ5EB52 335 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 MRGPRGQ86SM5 289 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 RNF115Q9Y4L5 304 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 ABHD1Q96SE0 405 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 RAB33BQ9H082 229 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 COLQQ9Y215 455 aaPredicted RBP11.43□□□□□ -0.58
NEK9-201ENST00000238616 EXOGQ9Y2C4 368 aaKnown RBP11.43□□□□□ -0.58
NEK9-201ENST00000238616 TRAV21A0A0B4J279 112 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 PSG9Q00887 426 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 PCOLCEQ15113 449 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 ABLIM2Q6H8Q1 611 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 C1orf174Q8IYL3 243 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 NPPCP23582 126 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 YAE1D1Q9NRH1 226 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 CBLN2Q8IUK8 224 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 COL25A1Q9BXS0 654 aaPredicted RBP11.43□□□□□ -0.58
NEK9-201ENST00000238616 DEGS2Q6QHC5 323 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 GLMPQ8WWB7 406 aa11.43□□□□□ -0.58
NEK9-201ENST00000238616 MBD3L1Q8WWY6 194 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 MUC21A0A0G2JKD1 596 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 MUC21A0A140T8X8 626 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 TNFSF10P50591 281 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 MUC21Q5SSG8 566 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 CALYQ9NYX4 217 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 M0QZK8 103 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 GGCTO75223 188 aaKnown RBP11.42□□□□□ -0.58
NEK9-201ENST00000238616 LHX8Q68G74 356 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 STHQ8IWL8 128 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 MZB1Q8WU39 189 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 ST6GAL2Q96JF0 529 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 JKAMPQ9P055 326 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 ITGBL1O95965 494 aaPredicted RBP11.42□□□□□ -0.58
NEK9-201ENST00000238616 ZNF415Q09FC8 603 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 TRBV20OR9-2A0A075B6H5 130 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 TRBV5-4A0A0C4DH59 114 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 LINC00862A6NCI5 91 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 TMEM183AQ8IXX5 376 aa11.42□□□□□ -0.58
NEK9-201ENST00000238616 RIF1Q5UIP0 2472 aaKnown RBP11.42□□□□□ -0.58
NEK9-201ENST00000238616 CXCL10P02778 98 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms