RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ELOBQ15370 118 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 FAM201AQ5SY85 155 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 C1orf210Q8IVY1 113 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 KLHDC1Q8N7A1 406 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 OR4C5Q8NGB2 326 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 OR4S2Q8NH73 311 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 TMEM54Q969K7 222 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 PIEZO2Q9H5I5 2752 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 SOD3P08294 240 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 PRB4P10163 310 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-201ENST00000226574 USF1P22415 310 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-201ENST00000226574 CCKARP32238 428 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 RIPPLY2Q5TAB7 128 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 ZNF441Q8N8Z8 693 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 SSBP3Q9BWW4 388 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-201ENST00000226574 ARFGEF3Q5TH69 2177 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 ODAMA1E959 279 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 ZNF729A6NN14 1252 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-201ENST00000226574 DIRC3C9JPN6 131 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 J3QR06 171 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 ATP5G3P48201 142 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 TNFAIP6P98066 277 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-201ENST00000226574 GCSAMLQ5JQS6 135 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 ZNRF1Q8ND25 227 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 DNASE2BQ8WZ79 361 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 FLYWCH2Q96CP2 140 aaKnown RBP11.69□□□□□ -0.54
NFKB1-201ENST00000226574 EGLN1Q9GZT9 426 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 RNF24Q9Y225 148 aa11.69□□□□□ -0.54
NFKB1-201ENST00000226574 C17orf98A8MV24 154 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 CT45A10P0DMU9 189 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 COX7A1P24310 79 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 TCF23Q7RTU1 214 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 OR1B1Q8NGR6 318 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 OR4X1Q8NH49 305 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 BARX1Q9HBU1 254 aaPredicted RBP11.68□□□□□ -0.54
NFKB1-201ENST00000226574 FOXD3Q9UJU5 478 aaPredicted RBP11.68□□□□□ -0.54
NFKB1-201ENST00000226574 M0R2Z0 102 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 KBTBD11O94819 623 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 SP1P08047 785 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 PRR31Q5SQ13 230 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 FBLN5Q9UBX5 448 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 NAGKQ9UJ70 344 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 RRHO14718 337 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 CELA3BP08861 270 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 GZMHP20718 246 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 CRYBB3P26998 211 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 OR10J1P30954 320 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 KLF3P57682 345 aaPredicted RBP11.68□□□□□ -0.54
NFKB1-201ENST00000226574 LINC00205P59089 165 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 HEPN1Q6WQI6 88 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 PQLC2Q6ZP29 291 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 DOLPP1Q86YN1 238 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 ZIC4Q8N9L1 334 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 ZNF596Q8TC21 504 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
NFKB1-201ENST00000226574 BMPR1BO00238 502 aa11.67□□□□□ -0.54
NFKB1-201ENST00000226574 CA11O75493 328 aa11.67□□□□□ -0.54
NFKB1-201ENST00000226574 FGF5P12034 268 aa11.67□□□□□ -0.54
NFKB1-201ENST00000226574 CISD1Q9NZ45 108 aaKnown RBP11.67□□□□□ -0.54
NFKB1-201ENST00000226574 TMSB15BA0A087X1C1 80 aa11.67□□□□□ -0.54
NFKB1-201ENST00000226574 UBE2CO00762 179 aa11.67□□□□□ -0.54
NFKB1-201ENST00000226574 GATA2P23769 480 aaPredicted RBP11.67□□□□□ -0.54
NFKB1-201ENST00000226574 PMS2CLQ68D20 193 aa11.67□□□□□ -0.54
NFKB1-201ENST00000226574 PDE6DO43924 150 aa11.67□□□□□ -0.54
NFKB1-201ENST00000226574 UMODP07911 640 aa11.67□□□□□ -0.54
NFKB1-201ENST00000226574 BPIFB3P59826 476 aa11.67□□□□□ -0.54
NFKB1-201ENST00000226574 P2RY6Q15077 328 aa11.67□□□□□ -0.54
NFKB1-201ENST00000226574 ABLIM2Q6H8Q1 611 aa11.67□□□□□ -0.54
NFKB1-201ENST00000226574 RAMP3O60896 148 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 NAPSAO96009 420 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 HINT1P49773 126 aaPredicted RBP11.66□□□□□ -0.54
NFKB1-201ENST00000226574 RPL11P62913 178 aaKnown RBP11.66□□□□□ -0.54
NFKB1-201ENST00000226574 RPL39P5Q59GN2 51 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 PPP1R32Q7Z5V6 425 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 UBALD2Q8IYN6 164 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 DEFB124Q8NES8 71 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 C18orf12Q96KH6 178 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 CCL13Q99616 98 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 TRAV17A0A0B4J275 112 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 C12orf77C9JDV5 145 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 WBP1Q96G27 269 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 HARBI1Q96MB7 349 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 PRDM14Q9GZV8 571 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 LIME1Q9H400 295 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 NPVFQ9HCQ7 196 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 PCNX3Q9H6A9 2034 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 CXorf1O96002 111 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 KCNMB1Q16558 191 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 KLF14Q8TD94 323 aaPredicted RBP11.66□□□□□ -0.54
NFKB1-201ENST00000226574 ZPBPQ9BS86 351 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 GNB4Q9HAV0 340 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 SDF2L1Q9HCN8 221 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 DEPPQ9NTK1 212 aa11.66□□□□□ -0.54
NFKB1-201ENST00000226574 NKX2-8O15522 239 aa11.65□□□□□ -0.54
NFKB1-201ENST00000226574 RPL31P62899 125 aaKnown RBP11.65□□□□□ -0.54
NFKB1-201ENST00000226574 ZNF525Q8N782 197 aa11.65□□□□□ -0.54
NFKB1-201ENST00000226574 PLPPR1Q8TBJ4 325 aa11.65□□□□□ -0.54
NFKB1-201ENST00000226574 REPIN1Q9BWE0 567 aaKnown RBP11.65□□□□□ -0.54
NFKB1-201ENST00000226574 QTRT1Q9BXR0 403 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms