RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 CYB561D1Q8N8Q1 229 aa9.5□□□□□ -0.89
KNOP1-201ENST00000219837 MARVELD3Q96A59 401 aa9.5□□□□□ -0.89
KNOP1-201ENST00000219837 SCARF2Q96GP6 870 aaPredicted RBP9.5□□□□□ -0.89
KNOP1-201ENST00000219837 IGHV3-48P01763 117 aa9.5□□□□□ -0.89
KNOP1-201ENST00000219837 HKR1P10072 659 aa9.5□□□□□ -0.89
KNOP1-201ENST00000219837 LINC00469Q8N7U9 141 aa9.5□□□□□ -0.89
KNOP1-201ENST00000219837 OR4C13Q8NGP0 309 aa9.5□□□□□ -0.89
KNOP1-201ENST00000219837 TMEM186Q96B77 213 aa9.5□□□□□ -0.89
KNOP1-201ENST00000219837 MRPL13Q9BYD1 178 aaKnown RBP9.5□□□□□ -0.89
KNOP1-201ENST00000219837 GEMIN7Q9H840 131 aaKnown RBP9.5□□□□□ -0.89
KNOP1-201ENST00000219837 DNAJC4Q9NNZ3 241 aa9.5□□□□□ -0.89
KNOP1-201ENST00000219837 TNFSF18Q9UNG2 199 aa9.5□□□□□ -0.89
KNOP1-201ENST00000219837 HS3ST3B1Q9Y662 390 aa9.5□□□□□ -0.89
KNOP1-201ENST00000219837 ZNF729A6NN14 1252 aaPredicted RBP9.49□□□□□ -0.89
KNOP1-201ENST00000219837 M0QZK8 103 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 GGCTO75223 188 aaKnown RBP9.49□□□□□ -0.89
KNOP1-201ENST00000219837 SEC11BP0C7V7 166 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 VDAC2P45880 294 aaPredicted RBP9.49□□□□□ -0.89
KNOP1-201ENST00000219837 LBHQ53QV2 105 aaPredicted RBP9.49□□□□□ -0.89
KNOP1-201ENST00000219837 FGFRL1Q8N441 504 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 C17orf51A8MQB3 221 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 IRF3Q14653 427 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 ZNF146Q15072 292 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 C11orf91Q3C1V1 193 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 SIGIRRQ6IA17 410 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 FAM206AQ9NX38 181 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 SIRT4Q9Y6E7 314 aaPredicted RBP9.49□□□□□ -0.89
KNOP1-201ENST00000219837 SCN4AP35499 1836 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 A0A1W2PP11 408 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 PSMB11A5LHX3 300 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 MOSP00540 346 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 IGKV1D-33P01593 117 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 IGKV1-33P01594 117 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 MRPL18Q9H0U6 180 aaKnown RBP9.49□□□□□ -0.89
KNOP1-201ENST00000219837 WNT5BQ9H1J7 359 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 LHFPL6Q9Y693 200 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 GOLGA4Q13439 2230 aaKnown RBP9.49□□□□□ -0.89
KNOP1-201ENST00000219837 F12P00748 615 aaPredicted RBP9.49□□□□□ -0.89
KNOP1-201ENST00000219837 BSPH1Q075Z2 132 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 C8orf82Q6P1X6 216 aaPredicted RBP9.49□□□□□ -0.89
KNOP1-201ENST00000219837 SIGLEC12Q96PQ1 595 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 PDCD11Q14690 1871 aaKnown RBP9.49□□□□□ -0.89
KNOP1-201ENST00000219837 ZNF646O15015 1829 aaPredicted RBP9.49□□□□□ -0.89
KNOP1-201ENST00000219837 IGHMP01871 453 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 LINC00305Q7Z4B0 112 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 SGMS2Q8NHU3 365 aa9.49□□□□□ -0.89
KNOP1-201ENST00000219837 OTX1P32242 354 aaPredicted RBP9.48□□□□□ -0.89
KNOP1-201ENST00000219837 FAM3BP58499 235 aaPredicted RBP9.48□□□□□ -0.89
KNOP1-201ENST00000219837 IGHV3-35A0A0C4DH35 117 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 GZMMP51124 257 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 PKIAP61925 76 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 CACNG7P62955 275 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 TMEM45BQ96B21 275 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 IGHV3-49A0A0A0MS15 119 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 FBLL1A6NHQ2 334 aaKnown RBP9.48□□□□□ -0.89
KNOP1-201ENST00000219837 ZNF345Q14585 488 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 RPL39P5Q59GN2 51 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 RARRES2Q99969 163 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 SELENOTP62341 195 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 SAXO1Q8IYX7 474 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 AQP3Q92482 292 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 ZIC3O60481 467 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 ISG15P05161 165 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 SERF2P84101 59 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 NSUN5P1Q3KNT7 163 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 ZNF818PQ6ZRF7 136 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 STPG2Q8N412 459 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 OR4X2Q8NGF9 303 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 OR5P3Q8WZ94 311 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 MEGF10Q96KG7 1140 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 AMELYQ99218 206 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 TRAF4Q9BUZ4 470 aaPredicted RBP9.48□□□□□ -0.89
KNOP1-201ENST00000219837 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
KNOP1-201ENST00000219837 IGHV3OR16-13A0A075B7E8 117 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 IGHV3-74A0A0B4J1X5 117 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 CEACAM4O75871 244 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 TIAF1O95411 115 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 NPBWR2P48146 333 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 TNFRSF9Q07011 255 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 VAX1Q5SQQ9 334 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 MBNL2Q5VZF2 373 aaKnown RBP9.47□□□□□ -0.89
KNOP1-201ENST00000219837 HOXB1P14653 301 aaPredicted RBP9.47□□□□□ -0.89
KNOP1-201ENST00000219837 SUMO2P61956 95 aaKnown RBP9.47□□□□□ -0.89
KNOP1-201ENST00000219837 FAM27E3Q08E93 113 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 CSRP2Q16527 193 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 HSPB9Q9BQS6 159 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 CFHR5Q9BXR6 569 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 SH3BGRL3Q9H299 93 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 A0A1W2PQM1 296 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 IL4P05112 153 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 LIMS1P48059 325 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 NUTF2P61970 127 aaKnown RBP9.47□□□□□ -0.89
KNOP1-201ENST00000219837 UNC119Q13432 240 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 FAM209AQ5JX71 171 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 MARCH11A6NNE9 402 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 RECKO95980 971 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 FUT5Q11128 374 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 TAF15Q92804 592 aaKnown RBP eCLIP9.47□□□□□ -0.89
KNOP1-201ENST00000219837 LINC01587Q99440 93 aa9.47□□□□□ -0.89
KNOP1-201ENST00000219837 TMEM106BQ9NUM4 274 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms