RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 TMEM241Q24JQ0 296 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 RPL39P5Q59GN2 51 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 OR5D13Q8NGL4 314 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 RHOVQ96L33 236 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 RPRMQ9NS64 109 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 BSPH1Q075Z2 132 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 GAMTQ14353 236 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 LILRB1Q8NHL6 650 aaPredicted RBP10.18□□□□□ -0.78
CHPF2-201ENST00000035307 GAR1Q9NY12 217 aaKnown RBP10.18□□□□□ -0.78
CHPF2-201ENST00000035307 ZNF835Q9Y2P0 537 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 NBEAQ8NFP9 2946 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 WIPF3A6NGB9 483 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 CD55P08174 381 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 MMP7P09237 267 aaPredicted RBP10.18□□□□□ -0.78
CHPF2-201ENST00000035307 TNFRSF1AP19438 455 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 CRYGSP22914 178 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 RTP5Q14D33 572 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 FAM53AQ6NSI3 398 aaPredicted RBP10.18□□□□□ -0.78
CHPF2-201ENST00000035307 LINC00518Q8N0U6 118 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 OR4P4Q8NGL7 312 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 FAM57AQ8TBR7 257 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 ZNF251Q9BRH9 671 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 CISD1Q9NZ45 108 aaKnown RBP10.18□□□□□ -0.78
CHPF2-201ENST00000035307 ONECUT1Q9UBC0 465 aa10.18□□□□□ -0.78
CHPF2-201ENST00000035307 C12orf77C9JDV5 145 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 C11orf94C9JXX5 98 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 LY86O95711 162 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 THBS3P49746 956 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 ERHP84090 104 aaKnown RBP10.17□□□□□ -0.78
CHPF2-201ENST00000035307 ZNF474Q6S9Z5 364 aaPredicted RBP10.17□□□□□ -0.78
CHPF2-201ENST00000035307 Q6ZS92 163 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 RNF166Q96A37 237 aaPredicted RBP10.17□□□□□ -0.78
CHPF2-201ENST00000035307 DMRTA2Q96SC8 542 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 TMEM147Q9BVK8 224 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 COL12A1Q99715 3063 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 TNCP24821 2201 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 IGHV2OR16-5A0A0B4J2B6 119 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 BSXQ3C1V8 233 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 COMMD1Q8N668 190 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 BOD1Q96IK1 185 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 TOLLIPQ9H0E2 274 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 RBKSQ9H477 322 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 ZZEF1O43149 2961 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 A0A1B0GU03 582 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 G3V3Q6 166 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 H0Y980 276 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 GALR1P47211 349 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 CCL20P78556 96 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 TIGITQ495A1 244 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 SPNS3Q6ZMD2 512 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 ZNF705AQ6ZN79 300 aaPredicted RBP10.17□□□□□ -0.78
CHPF2-201ENST00000035307 C15orf54Q8N8G6 183 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 SGK494Q96LW2 274 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 C1QTNF5Q9BXJ0 243 aa10.17□□□□□ -0.78
CHPF2-201ENST00000035307 SRSF10O75494 262 aaKnown RBP10.16□□□□□ -0.78
CHPF2-201ENST00000035307 RPL31P62899 125 aaKnown RBP10.16□□□□□ -0.78
CHPF2-201ENST00000035307 QRFPP83859 136 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 UNQ6494/PRO21346Q6UXR6 183 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 FAM89BQ8N5H3 189 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 MRPL30Q8TCC3 161 aaKnown RBP10.16□□□□□ -0.78
CHPF2-201ENST00000035307 FAM216AQ8WUB2 273 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 TMEM45BQ96B21 275 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 ZNF98A6NK75 572 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 C17orf98A8MV24 154 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 HLA-GP17693 338 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 UCNP55089 124 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 ZNF439Q8NDP4 499 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 OR8G5Q8NG78 346 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 MSRB2Q9Y3D2 182 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 A0A0G2JNJ9 132 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 GAPDHP04406 335 aaKnown RBP10.16□□□□□ -0.78
CHPF2-201ENST00000035307 CHRNB4P30926 498 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 FAM3BP58499 235 aaPredicted RBP10.16□□□□□ -0.78
CHPF2-201ENST00000035307 LRRC10Q5BKY1 277 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 MIC13Q5XKP0 118 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 OR13A1Q8NGR1 328 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 WFDC1Q9HC57 220 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 Q9UFV3 132 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 ODAMA1E959 279 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 BTBD17A6NE02 478 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 NDUFA2O43678 99 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 COX7A2P2O60397 106 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 TRGC2P03986 189 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 MEOX2P50222 304 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 B2MP61769 119 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 HARBI1Q96MB7 349 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 LINC00470Q9BZP3 86 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 GNB4Q9HAV0 340 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 LYRM2Q9NU23 88 aaPredicted RBP10.16□□□□□ -0.78
CHPF2-201ENST00000035307 RNF7Q9UBF6 113 aa10.16□□□□□ -0.78
CHPF2-201ENST00000035307 ZMAT5Q9UDW3 170 aaKnown RBP10.16□□□□□ -0.78
CHPF2-201ENST00000035307 ACANP16112 2415 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 TGIF2-C20orf24A0A0A6YYL0 155 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 TRAV24A0A0B4J272 114 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 NCBP2LA6PVI3 153 aaKnown RBP10.15□□□□□ -0.78
CHPF2-201ENST00000035307 H3BTX0 84 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 PITX3O75364 302 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 MBP02144 154 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 CCL1P22362 96 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 UBE2G1P62253 170 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms