RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 GFRA3O60609 400 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 EML2O95834 649 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 EGR2P11161 476 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-212ENST00000636194 P2RY1P47900 373 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 UCP2P55851 309 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 SURF2Q15527 256 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-212ENST00000636194 MPV17LQ2QL34 196 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 SSMEM1Q8WWF3 244 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 TM4SF18Q96CE8 201 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 SDF2Q99470 211 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 HSF4Q9ULV5 492 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 UBR3Q6ZT12 1888 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-212ENST00000636194 EIF3GO75821 320 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCN1A-212ENST00000636194 AMY1AP04745 511 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 CGB3P0DN86 165 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 IBA57Q5T440 356 aaKnown RBP5.27□□□□□ -1.57
SCN1A-212ENST00000636194 PCSK4Q6UW60 755 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 PRSS45Q7RTY3 260 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 GATD1Q8NB37 220 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 ZNF680Q8NEM1 530 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 SMOC1Q9H4F8 434 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 FRRS1LQ9P0K9 344 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 SHPRHQ149N8 1683 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 CTXND1A0A1B0GTU2 59 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 FAM72CH0Y354 149 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 LINC00869P0C866 280 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 PTGER1P34995 402 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 FAM72AQ5TYM5 149 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 FAM72DQ6L9T8 149 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 FAM72BQ86X60 149 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 NPWQ8N729 165 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 SLC16A11Q8NCK7 471 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 SMIM4Q8WVI0 70 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 KCNK17Q96T54 332 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 PRSS27Q9BQR3 290 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 A0A087WUJ7 227 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 G3V2L1 256 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 ALX3O95076 343 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 PI3P19957 117 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 ZNF770Q6IQ21 691 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-212ENST00000636194 RFESDQ8TAC1 157 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 SCMH1Q96GD3 660 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 LTBP3Q9NS15 1303 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-212ENST00000636194 LINC01549A6NIU2 74 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 PLPP1O14494 284 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 IFI27P40305 119 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-212ENST00000636194 ZNF146Q15072 292 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 SAXO2Q658L1 398 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 STHQ8IWL8 128 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 ITLN2Q8WWU7 325 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-212ENST00000636194 NPCDR1Q9BY65 106 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 NRN1Q9NPD7 142 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 IGHV3-20A0A0C4DH32 117 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 KLKB1P03952 638 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 CLDND2Q8NHS1 167 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 C16orf52Q8NHV5 167 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 FUT9Q9Y231 359 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 IGKV3D-20A0A0C4DH25 116 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 SNAI1O95863 264 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-212ENST00000636194 GALP22466 123 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 ATP6V0CP27449 155 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 RPL8P62917 257 aaKnown RBP5.26□□□□□ -1.57
SCN1A-212ENST00000636194 TMEM177Q53S58 311 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 MMD2Q8IY49 270 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 ADAD2Q8NCV1 583 aaKnown RBP5.26□□□□□ -1.57
SCN1A-212ENST00000636194 SEMA5BQ9P283 1151 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 PKD1L3Q7Z443 1732 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 LRRC37A3O60309 1634 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 TSPAN2O60636 221 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 APOMO95445 188 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 DPTQ07507 201 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 ANKRD34AQ69YU3 496 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 INO80CQ6PI98 192 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-212ENST00000636194 C8orf44Q96CB5 159 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 VN1R1Q9GZP7 353 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 GPR27Q9NS67 375 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 ZNHIT1O43257 154 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 IGSF11Q5DX21 431 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 TCTN3Q6NUS6 607 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 DNM1P46Q6ZS02 220 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 LURAP1LQ8IV03 231 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 AMER3Q8N944 861 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 OR8B12Q8NGG6 310 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 CDCA4Q9BXL8 241 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 SPANXDQ9BXN6 97 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 TRBV20OR9-2A0A075B6H5 130 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 A0A1B0GW15 77 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 A1L4Q6 167 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 OTOSQ8NHW6 89 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 IKZF4Q9H2S9 585 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 ZFP64Q9NPA5 681 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 LRP12Q9Y561 859 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 DAPP51397 102 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 P2RY4P51582 365 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 SLC25A1P53007 311 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 ATXN8Q156A1 80 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 C4orf32Q8N8J7 132 aa5.26□□□□□ -1.57
SCN1A-212ENST00000636194 ALG14Q96F25 216 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms