RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 RPS24P62847 133 aaKnown RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 CACNG7P62955 275 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 CDK6Q00534 326 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 COL10A1Q03692 680 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 IL15RAQ13261 267 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 JOSD1Q15040 202 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 SCGB2B2Q4G0G5 96 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 KLF17Q5JT82 389 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 PAGE3Q5JUK9 113 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 GLYATL3Q5SZD4 288 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 ARTNQ5T4W7 220 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 PRSS54Q6PEW0 395 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 C20orf196Q8IYI0 205 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 KMT2EQ8IZD2 1858 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 C11orf42Q8N5U0 333 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 TMEM229BQ8NBD8 167 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 TMEM174Q8WUU8 243 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 ISOC1Q96CN7 298 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 SMIM8Q96KF7 97 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 BTN2A3PQ96KV6 586 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 NRTNQ99748 197 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 PSMG3Q9BT73 122 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 IFI27L2Q9H2X8 130 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 CACYBPQ9HB71 228 aaKnown RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 TAF9BQ9HBM6 251 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 HES4Q9HCC6 221 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 SCN3BQ9NY72 215 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 MSRB1Q9NZV6 116 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 MED11Q9P086 117 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 KLK11Q9UBX7 282 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 SLC23A2Q9UGH3 650 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 MCTS1Q9ULC4 181 aaKnown RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 PSME4Q14997 1843 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 PLAC8L1A1L4L8 177 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 I3L521 148 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 EIF4EP06730 217 aaKnown RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 FRMD6-AS1P0C7T7 363 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 NHLRC4P0CG21 123 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 IGHV4-30-4P0DP06 118 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 SLC2A2P11168 524 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-213ENST00000630925 IFITM3Q01628 133 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 PSG7Q13046 419 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 NRF1Q16656 503 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 ANKRD22Q5VYY1 191 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 CNIH2Q6PI25 160 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 Q6ZN92 141 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 PPP1R27Q86WC6 154 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 TCTEX1D1Q8N7M0 179 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF491Q8N8L2 437 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 KLK6Q92876 244 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 METTL26Q96S19 204 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 C1QTNF4Q9BXJ3 329 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 SLC29A3Q9BZD2 475 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 CALYQ9NYX4 217 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 SPEGQ15772 3267 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 MYH11P35749 1972 aa3.86□□□□□ -1.79
SDCBP-213ENST00000630925 DLG5Q8TDM6 1919 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 CIB4A0PJX0 185 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 RBMY1BA6NDE4 496 aaKnown RBP3.85□□□□□ -1.79
SDCBP-213ENST00000630925 RBMY1EA6NEQ0 496 aaKnown RBP3.85□□□□□ -1.79
SDCBP-213ENST00000630925 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-213ENST00000630925 I3L4J1 428 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 SAP18O00422 153 aaKnown RBP3.85□□□□□ -1.79
SDCBP-213ENST00000630925 TNFSF12O43508 249 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 NDUFC2O95298 119 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 PTHP01270 115 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 RBMY1DP0C7P1 496 aaKnown RBP3.85□□□□□ -1.79
SDCBP-213ENST00000630925 RBMY1A1P0DJD3 496 aaKnown RBP3.85□□□□□ -1.79
SDCBP-213ENST00000630925 SMIM17P0DL12 118 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 TDGF1P13385 188 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 FOLR2P14207 255 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 CCL1P22362 96 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 CTBP2P56545 445 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 COPZ1P61923 177 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 RHOGP84095 191 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 ENDOGQ14249 297 aaKnown RBP3.85□□□□□ -1.79
SDCBP-213ENST00000630925 BATFQ16520 125 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 SLC25A30Q5SVS4 291 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 FAM219BQ5XKK7 198 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 FAAP20Q6NZ36 180 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 HRCT1Q6UXD1 115 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 CT55Q8WUE5 264 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 ZNF501Q96CX3 271 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-213ENST00000630925 ADAT3Q96EY9 351 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-213ENST00000630925 MGLLQ99685 303 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 OR8D2Q9GZM6 311 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 EXOSC3Q9NQT5 275 aaKnown RBP3.85□□□□□ -1.79
SDCBP-213ENST00000630925 SPRR3Q9UBC9 169 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 VSIG4Q9Y279 399 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 ROBO3Q96MS0 1386 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 ZMYM2Q9UBW7 1377 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 GVINP1Q7Z2Y8 2422 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 FAM183AA6NL82 134 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 NUDT14O95848 222 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 OR2H2O95918 312 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 LINC00271P0C7V0 271 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 BRS3P32247 399 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 DRD3P35462 400 aa3.85□□□□□ -1.79
SDCBP-213ENST00000630925 PRR3P79522 188 aaKnown RBP3.85□□□□□ -1.79
SDCBP-213ENST00000630925 SLC10A1Q14973 349 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms