RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 GFRA3O60609 400 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 MDKP21741 143 aaPredicted RBP10.99□□□□□ -0.65
SCN8A-209ENST00000627620 BPIFA4PQ86YQ2 179 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 ABHD12Q8N2K0 398 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 TAF15Q92804 592 aaKnown RBP eCLIP10.99□□□□□ -0.65
SCN8A-209ENST00000627620 Q96M66 194 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 TBX15Q96SF7 602 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 HSPB7Q9UBY9 170 aa10.99□□□□□ -0.65
SCN8A-209ENST00000627620 LY75O60449 1722 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 HKR1P10072 659 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 IBA57Q5T440 356 aaKnown RBP10.98□□□□□ -0.65
SCN8A-209ENST00000627620 STPG3Q8N7X2 389 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 MIOXQ9UGB7 285 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 M0R3E3 92 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 TLNRD1Q9H1K6 362 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.98□□□□□ -0.65
SCN8A-209ENST00000627620 FCGR2BP31994 310 aaPredicted RBP10.98□□□□□ -0.65
SCN8A-209ENST00000627620 HSPE1P61604 102 aaKnown RBP10.98□□□□□ -0.65
SCN8A-209ENST00000627620 JPT1Q9UK76 154 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 hCG_38984A0A1B0GV85 526 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 OR4C46A6NHA9 309 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 IGHMP01871 453 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 GLIPR1P48060 266 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 ZXDCQ2QGD7 858 aaPredicted RBP10.98□□□□□ -0.65
SCN8A-209ENST00000627620 PPP1R32Q7Z5V6 425 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 ZNF383Q8NA42 475 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 PAM16Q9Y3D7 125 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 TMEM56-RWDD3S4R434 201 aa10.98□□□□□ -0.65
SCN8A-209ENST00000627620 C17orf51A8MQB3 221 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 OR2A4O95047 310 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 IGKV3-11P04433 115 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 NPBWR2P48146 333 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 MFAP4P55083 255 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 MEF2BQ02080 365 aaPredicted RBP10.97□□□□□ -0.65
SCN8A-209ENST00000627620 OR52M1Q8NGK5 317 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 TMEM54Q969K7 222 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 OR2A7Q96R45 310 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 TIMP4Q99727 224 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 COL5A3P25940 1745 aaPredicted RBP10.97□□□□□ -0.65
SCN8A-209ENST00000627620 A6NDN8 102 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 MARCH11A6NNE9 402 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 LINC01590Q5TEZ4 76 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 MUC15Q8N387 334 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 GDF15Q99988 308 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 SMIM6P0DI80 62 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 EGR4Q05215 589 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 ZFC3H1O60293 1989 aaKnown RBP10.97□□□□□ -0.65
SCN8A-209ENST00000627620 SYNGR3O43761 229 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 ACAA1P09110 424 aaPredicted RBP10.97□□□□□ -0.65
SCN8A-209ENST00000627620 PTGDSP41222 190 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 PCSK4Q6UW60 755 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 UNQ9370/PRO34162Q6UXP9 181 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 OR9G1Q8NH87 305 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 OR4C12Q96R67 309 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 TXNDC17Q9BRA2 123 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 DIRC3C9JPN6 131 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 FAM90A26D6RGX4 464 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 ZG16O60844 167 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 ATP5J2P56134 94 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 TCTAP57738 103 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 PQLC2Q6ZP29 291 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 OR1N2Q8NGR9 330 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 ZFP30Q9Y2G7 519 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 ARFGEF1Q9Y6D6 1849 aa10.97□□□□□ -0.65
SCN8A-209ENST00000627620 LOC105371242A0A075B767 164 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 WNT9BO14905 357 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 S1PR2O95136 353 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 TNFRSF9Q07011 255 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 SMAGPQ0VAQ4 97 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 LY6EQ16553 131 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 C5orf66Q9H5L9 145 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 IGHV1-69-2A0A0G2JMI3 117 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 RECKO95980 971 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 RRN3P1Q2M238 152 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 C10orf128Q5T292 105 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 ZNF660Q6AZW8 331 aaPredicted RBP10.96□□□□□ -0.65
SCN8A-209ENST00000627620 SYT8Q8NBV8 401 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 TDRD15B5MCY1 1934 aaKnown RBP10.96□□□□□ -0.65
SCN8A-209ENST00000627620 TEX29Q8N6K0 151 aa10.96□□□□□ -0.65
SCN8A-209ENST00000627620 QTRT1Q9BXR0 403 aaKnown RBP10.96□□□□□ -0.65
SCN8A-209ENST00000627620 COL11A2P13942 1736 aaPredicted RBP10.96□□□□□ -0.66
SCN8A-209ENST00000627620 IGHV3OR16-12A0A075B7B8 117 aa10.96□□□□□ -0.66
SCN8A-209ENST00000627620 HSPB1P04792 205 aaKnown RBP10.96□□□□□ -0.66
SCN8A-209ENST00000627620 CD99P14209 185 aa10.96□□□□□ -0.66
SCN8A-209ENST00000627620 BTF3P20290 206 aaKnown RBP10.96□□□□□ -0.66
SCN8A-209ENST00000627620 FDCSPQ8NFU4 85 aa10.96□□□□□ -0.66
SCN8A-209ENST00000627620 ZNF502Q8TBZ5 544 aa10.96□□□□□ -0.66
SCN8A-209ENST00000627620 ZNF729A6NN14 1252 aaPredicted RBP10.96□□□□□ -0.66
SCN8A-209ENST00000627620 REG1AP05451 166 aa10.96□□□□□ -0.66
SCN8A-209ENST00000627620 NMBP08949 121 aa10.96□□□□□ -0.66
SCN8A-209ENST00000627620 NMUP48645 174 aa10.96□□□□□ -0.66
SCN8A-209ENST00000627620 ZNF818PQ6ZRF7 136 aa10.96□□□□□ -0.66
SCN8A-209ENST00000627620 DNAJC4Q9NNZ3 241 aa10.96□□□□□ -0.66
SCN8A-209ENST00000627620 NPDC1Q9NQX5 325 aaPredicted RBP10.96□□□□□ -0.66
SCN8A-209ENST00000627620 RELBQ01201 579 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 IGKV3D-15A0A087WSY6 115 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 IGKV3-15P01624 115 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 KLK2P20151 261 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 CRYBA2P53672 197 aa10.95□□□□□ -0.66
SCN8A-209ENST00000627620 OR4C13Q8NGP0 309 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms