RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SNRPD2P62316 118 aaKnown RBP2.47□□□□□ -2.01
BRCA1-229ENST00000621897 GNG5P63218 68 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 FABP5Q01469 135 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 ZNF616Q08AN1 781 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 TMEM267Q0VDI3 215 aaPredicted RBP2.47□□□□□ -2.01
BRCA1-229ENST00000621897 KIAA0087Q14695 138 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 RGNQ15493 299 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 OR8B8Q15620 311 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 GRK1Q15835 563 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 C6orf99Q4VX62 202 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 CENPWQ5EE01 88 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 RNASE10Q5GAN6 216 aaKnown RBP2.47□□□□□ -2.01
BRCA1-229ENST00000621897 CLLU1OSQ5K130 101 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 CLEC20AQ6ZU45 233 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 STRADAQ7RTN6 431 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 LY6G5BQ8NDX9 201 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 OR13C4Q8NGS5 318 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 GPR119Q8TDV5 335 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 CANT1Q8WVQ1 401 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 REEP6Q96HR9 211 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 OR52B2Q96RD2 323 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 PBDC1Q9BVG4 233 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 MND1Q9BWT6 205 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 HMG20AQ9NP66 347 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 CALML5Q9NZT1 146 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 HSPB8Q9UJY1 196 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 DCCP43146 1447 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 FGD6Q6ZV73 1430 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 MED23Q9ULK4 1368 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 WDR62O43379 1518 aa2.47□□□□□ -2.01
BRCA1-229ENST00000621897 XIRP1Q702N8 1843 aaKnown RBP2.47□□□□□ -2.01
BRCA1-229ENST00000621897 TRAV36DV7A0A075B6V5 113 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 IGHV6-1A0A0B4J1U7 121 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 LRCOL1A6NCL2 159 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF850A8MQ14 1090 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 TMEM250H0YL14 139 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 H3BP45 60 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 J3KT08 172 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 K7ERU9 68 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 AIPO00170 330 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 SLC22A1O15245 554 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF780AO75290 641 aaPredicted RBP2.46□□□□□ -2.02
BRCA1-229ENST00000621897 DHRS3O75911 302 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 NDUFC2O95298 119 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 METTL15P1P0C7V9 234 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 UBBP0CG47 229 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 CTLA4P16410 223 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 ORM2P19652 201 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 CCL1P22362 96 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 GADD45AP24522 165 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 GFERP55789 205 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 CTBP2P56545 445 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 SYNJ2BPP57105 145 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 TAS2R19P59542 299 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 NCALDP61601 193 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 RRAS2P62070 204 aaPredicted RBP2.46□□□□□ -2.02
BRCA1-229ENST00000621897 TNFAIP6P98066 277 aaPredicted RBP2.46□□□□□ -2.02
BRCA1-229ENST00000621897 IFITM3Q01628 133 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 EIF4EBP1Q13541 118 aaPredicted RBP2.46□□□□□ -2.02
BRCA1-229ENST00000621897 ARFRP1Q13795 201 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF404Q494X3 552 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 MORN2Q502X0 79 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 MESTQ5EB52 335 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 TNFAIP8L3Q5GJ75 292 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 IBA57Q5T440 356 aaKnown RBP2.46□□□□□ -2.02
BRCA1-229ENST00000621897 FAM222AQ5U5X8 452 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 GLYATQ6IB77 296 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 HAGHLQ6PII5 290 aaPredicted RBP2.46□□□□□ -2.02
BRCA1-229ENST00000621897 FBXW12Q6X9E4 464 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 ZFP2Q6ZN57 461 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 Q6ZRU5 148 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 LINC00337Q8N6G1 96 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 ZIC4Q8N9L1 334 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 OR5A1Q8NGJ0 315 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 OR2T4Q8NH00 348 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 OR51H1Q8NH63 302 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 RXFP4Q8TDU9 374 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 THEM6Q8WUY1 208 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 FAM151AQ8WW52 585 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 MALSU1Q96EH3 234 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 NEURL3Q96EH8 262 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 C14orf144Q96I85 54 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 OR2M2Q96R28 347 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 LYSMD1Q96S90 227 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 TBL1XR1Q9BZK7 514 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 EIF5A2Q9GZV4 153 aaKnown RBP2.46□□□□□ -2.02
BRCA1-229ENST00000621897 PBOV1Q9GZY1 135 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 TMEM222Q9H0R3 208 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 VCXQ9H320 206 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 EDA2RQ9HAV5 297 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 NOX3Q9HBY0 568 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 FAM49BQ9NUQ9 324 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 UQCC1Q9NVA1 299 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 AIG1Q9NVV5 245 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 FIS1Q9Y3D6 152 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 INSIG2Q9Y5U4 225 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 HEBP2Q9Y5Z4 205 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 ENPP4Q9Y6X5 453 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 ABCC12Q96J65 1359 aa2.46□□□□□ -2.02
BRCA1-229ENST00000621897 HECW2Q9P2P5 1572 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms