RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 FAM90A12PA8MX19 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A5PA8MXJ8 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A23PA8MXZ1 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 SPINK4O60575 86 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A15PP0C7V4 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A13PP0C7W8 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A14PP0C7W9 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FAM90A24PP0C7X0 464 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 SLC35B1P78383 322 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 FABP9Q0Z7S8 132 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 IZUMO4Q1ZYL8 232 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 TEX261Q6UWH6 196 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 TEX29Q8N6K0 151 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 PRSS33Q8NF86 280 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 OR4P4Q8NGL7 312 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 NEU4Q8WWR8 484 aaPredicted RBP7.87□□□□□ -1.15
GGA3-223ENST00000621870 NRIP2Q9BQI9 281 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 DCTN5Q9BTE1 182 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 SEMA5BQ9P283 1151 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 NEUROG3Q9Y4Z2 214 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 U3KQ87 197 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 SS18L1O75177 396 aaPredicted RBP7.87□□□□□ -1.15
GGA3-223ENST00000621870 PAFAH1B2P68402 229 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 GUK1Q16774 197 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 LINC00052Q96N35 136 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 MRPL37Q9BZE1 423 aaKnown RBP7.87□□□□□ -1.15
GGA3-223ENST00000621870 OPN4Q9UHM6 478 aa7.87□□□□□ -1.15
GGA3-223ENST00000621870 MED13Q9UHV7 2174 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 A0A1B0GU03 582 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 F5H697 171 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 ERVH48-1M5A8F1 160 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 CDK2AP1O14519 115 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 HLA-GP17693 338 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 PSG5Q15238 335 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 BATFQ16520 125 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 C21orf62-AS1Q17RA5 79 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 VAX1Q5SQQ9 334 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 LRRC75AQ8NAA5 344 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 LRRK2Q5S007 2527 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 ZNF729A6NN14 1252 aaPredicted RBP7.86□□□□□ -1.15
GGA3-223ENST00000621870 IGHV3-48P01763 117 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 KIR2DL2P43627 348 aaPredicted RBP7.86□□□□□ -1.15
GGA3-223ENST00000621870 UNQ9370/PRO34162Q6UXP9 181 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 MMP24Q9Y5R2 645 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 GUCA2BQ16661 112 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 NRN1LQ496H8 165 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 TMEM88Q6PEY1 159 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 PDPNQ86YL7 162 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 SAXO1Q8IYX7 474 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 FGFRL1Q8N441 504 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 SLC24A4Q8NFF2 622 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 FGFBP3Q8TAT2 258 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 C1QTNF5Q9BXJ0 243 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 HSF4Q9ULV5 492 aa7.86□□□□□ -1.15
GGA3-223ENST00000621870 USP9YO00507 2555 aaPredicted RBP7.85□□□□□ -1.15
GGA3-223ENST00000621870 TMEM14DPA8MWL7 114 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 C1QTNF9BB2RNN3 333 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 TRIM77I1YAP6 450 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 C1QTNF9P0C862 333 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 PRR30Q53SZ7 412 aaPredicted RBP7.85□□□□□ -1.15
GGA3-223ENST00000621870 ZNF385CQ66K41 422 aaPredicted RBP7.85□□□□□ -1.15
GGA3-223ENST00000621870 DHRS7BQ6IAN0 325 aaPredicted RBP7.85□□□□□ -1.15
GGA3-223ENST00000621870 ZNF66Q6ZN08 573 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 GGNQ86UU5 652 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 ZIC4Q8N9L1 334 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 WBP1Q96G27 269 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 CXorf58Q96LI9 332 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 YAE1D1Q9NRH1 226 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 SORL1Q92673 2214 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 C20orf202A1L168 122 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 K7ENP7 123 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 TIMP3P35625 211 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 C4orf17Q53FE4 359 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 PLA2G2CQ5R387 149 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 ACP7Q6ZNF0 438 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 CENPVQ7Z7K6 275 aaPredicted RBP7.85□□□□□ -1.15
GGA3-223ENST00000621870 VKORC1L1Q8N0U8 176 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 ZNF561Q8N587 486 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 CHAC2Q8WUX2 184 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 SSBP3Q9BWW4 388 aaPredicted RBP7.85□□□□□ -1.15
GGA3-223ENST00000621870 IL36RNQ9UBH0 155 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 PRR14LQ5THK1 2151 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 USP9XQ93008 2570 aaPredicted RBP7.85□□□□□ -1.15
GGA3-223ENST00000621870 RAB19A4D1S5 217 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 SLC31A2O15432 143 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 PLAUP00749 431 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 NBL1P41271 181 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 SULT1A1P50225 295 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 TEPPQ6URK8 271 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 DNM1P46Q6ZS02 220 aa7.85□□□□□ -1.15
GGA3-223ENST00000621870 RGP1Q92546 391 aaPredicted RBP7.85□□□□□ -1.15
GGA3-223ENST00000621870 TECRQ9NZ01 308 aaKnown RBP7.85□□□□□ -1.15
GGA3-223ENST00000621870 SCGB1D1O95968 90 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 CCL3L1P16619 93 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 WNT5AP41221 380 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 EWSR1Q01844 656 aaKnown RBP eCLIP7.84□□□□□ -1.15
GGA3-223ENST00000621870 CXorf66Q5JRM2 361 aaPredicted RBP7.84□□□□□ -1.15
GGA3-223ENST00000621870 PCSK4Q6UW60 755 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.84□□□□□ -1.15
GGA3-223ENST00000621870 MDS2Q8NDY4 140 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms