RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 IZUMO4Q1ZYL8 232 aa16.29■□□□□ 0.2
LAPTM4B-204ENST00000619747 C1orf87Q8N0U7 546 aa16.29■□□□□ 0.2
LAPTM4B-204ENST00000619747 OR1P1Q8NH06 330 aa16.29■□□□□ 0.2
LAPTM4B-204ENST00000619747 M0R1B8 84 aa16.29■□□□□ 0.2
LAPTM4B-204ENST00000619747 GCH1P30793 250 aa16.29■□□□□ 0.2
LAPTM4B-204ENST00000619747 IGFL3Q6UXB1 125 aa16.29■□□□□ 0.2
LAPTM4B-204ENST00000619747 OR4X1Q8NH49 305 aa16.29■□□□□ 0.2
LAPTM4B-204ENST00000619747 RCC1LQ96I51 464 aaKnown RBP16.29■□□□□ 0.2
LAPTM4B-204ENST00000619747 RBFOX3A6NFN3 312 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 TMEM210A6NLX4 147 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 TUSC2O75896 110 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 HLA-DRB3P79483 266 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 MSMPQ1L6U9 139 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 TMEM182Q6ZP80 229 aaPredicted RBP16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 Q6ZS49 121 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 CYB561D1Q8N8Q1 229 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 ABHD17AQ96GS6 310 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 WFDC1Q9HC57 220 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 PPP1R3CQ9UQK1 317 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 RFNGQ9Y644 331 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 ATRXP46100 2492 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 J3QW42 95 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 SH2D1BO14796 132 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 SEC11BP0C7V7 166 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 ZNF16P17020 682 aaPredicted RBP16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 BMP5P22003 454 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 LMO1P25800 156 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 TFPI2P48307 235 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 AESQ08117 197 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 C22orf34Q6ZV56 151 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 LINC00596Q86U02 117 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 C11orf53Q8IXP5 236 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 TVP23CQ96ET8 276 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 DNAJC4Q9NNZ3 241 aa16.28■□□□□ 0.2
LAPTM4B-204ENST00000619747 MBD3L4A6NDZ8 208 aaPredicted RBP16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 MBD3L3A6NE82 208 aaPredicted RBP16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 MBD3L5A6NJ08 208 aaPredicted RBP16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 ADAM20O43506 726 aa16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 HAND1O96004 215 aa16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 RND3P61587 244 aa16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 CMTM1Q8IZ96 169 aa16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 MBD3L2Q8NHZ7 208 aaPredicted RBP16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 OR2W1Q9Y3N9 320 aa16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 M0QZK8 103 aa16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 GGCTO75223 188 aaKnown RBP16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 COL10A1Q03692 680 aa16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 ZNF718Q3SXZ3 478 aa16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 CXorf66Q5JRM2 361 aaPredicted RBP16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 ZNF324BQ6AW86 544 aaPredicted RBP16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 ZNF880Q6PDB4 577 aa16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 OR2Z1Q8NG97 314 aa16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 METRNQ9UJH8 293 aa16.27■□□□□ 0.2
LAPTM4B-204ENST00000619747 PGLYRP1O75594 196 aaPredicted RBP16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 HNF1AP20823 631 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 OMGP23515 440 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 BRS3P32247 399 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 FAM27E3Q08E93 113 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 MRPL41Q8IXM3 137 aaKnown RBP16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 LRTM2Q8N967 370 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 C1orf162Q8NEQ5 155 aaPredicted RBP16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 WFIKKN1Q96NZ8 548 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 NIPSNAP3BQ9BS92 247 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 RNF150Q9ULK6 438 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 KCNS2Q9ULS6 477 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 XKRY2A2RUG3 117 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 SCGB1D1O95968 90 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 SRP19P09132 144 aaKnown RBP16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 CTXN2P0C2S0 81 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 P2RY6Q15077 328 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 SELENOHQ8IZQ5 122 aaKnown RBP16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 ABHD14AQ9BUJ0 271 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 SLC25A15Q9Y619 301 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 ST8SIA3O43173 380 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 TLE4Q04727 773 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 PMS2P11Q13670 270 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 ZNF497Q6ZNH5 498 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 Q8IYB0 196 aa16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 CISD2Q8N5K1 135 aaKnown RBP16.26■□□□□ 0.19
LAPTM4B-204ENST00000619747 ELLP55199 621 aaPredicted RBP16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 ZNF146Q15072 292 aa16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 IQCJQ1A5X6 159 aa16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 SPRNQ5BIV9 151 aa16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 C1orf194Q5T5A4 169 aa16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 WDR82Q6UXN9 313 aa16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 POLR3KQ9Y2Y1 108 aaPredicted RBP16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 TPRP12270 2363 aaKnown RBP16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 IGLV1-44P01699 117 aa16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 CLEC2AQ6UVW9 174 aa16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 SLC35E3Q7Z769 313 aa16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 OR10A7Q8NGE5 316 aa16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 TAAR3PQ9P1P4 343 aa16.25■□□□□ 0.19
LAPTM4B-204ENST00000619747 E5RGE8 158 aa16.24■□□□□ 0.19
LAPTM4B-204ENST00000619747 PSG2P11465 335 aa16.24■□□□□ 0.19
LAPTM4B-204ENST00000619747 SRSF7Q16629 238 aaKnown RBP eCLIP16.24■□□□□ 0.19
LAPTM4B-204ENST00000619747 H1FOOQ8IZA3 346 aaPredicted RBP16.24■□□□□ 0.19
LAPTM4B-204ENST00000619747 PLPPR2Q96GM1 343 aa16.24■□□□□ 0.19
LAPTM4B-204ENST00000619747 ARV1Q9H2C2 271 aa16.24■□□□□ 0.19
LAPTM4B-204ENST00000619747 NSG2Q9Y328 171 aa16.24■□□□□ 0.19
LAPTM4B-204ENST00000619747 FAM24AA6NFZ4 105 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms