RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 FAM219AQ8IW50 185 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 ABHD14BQ96IU4 210 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 SEC11CQ9BY50 192 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 RBFOX3A6NFN3 312 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 IGHG3P01860 377 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 TIMP3P35625 211 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 KIR2DL2P43627 348 aaPredicted RBP11.82□□□□□ -0.52
CIITA-213ENST00000618327 SPCS3P61009 180 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 RNFT1Q5M7Z0 435 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 GFI1Q99684 422 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 COL25A1Q9BXS0 654 aaPredicted RBP11.82□□□□□ -0.52
CIITA-213ENST00000618327 MSRB2Q9Y3D2 182 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 PQLC2LA1A4F0 135 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 SCGB1C2P0DMR2 95 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 APOBEC3AP31941 199 aaPredicted RBP11.82□□□□□ -0.52
CIITA-213ENST00000618327 C5orf66Q9H5L9 145 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 INSIG2Q9Y5U4 225 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 K7N7A8 449 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 SOX15O60248 233 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 GLIPR1P48060 266 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 LBHQ53QV2 105 aaPredicted RBP11.81□□□□□ -0.52
CIITA-213ENST00000618327 ACSM6Q6P461 480 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 Q6ZN92 141 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 SLC25A28Q96A46 364 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 PACRGQ96M98 296 aaPredicted RBP11.81□□□□□ -0.52
CIITA-213ENST00000618327 PLSCR4Q9NRQ2 329 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 AKAP6Q13023 2319 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 ZNF737O75373 536 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 TUSC1Q2TAM9 212 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 DTD1Q8TEA8 209 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 DPF1Q92782 380 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 FBLN5Q9UBX5 448 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 DOPEY2Q9Y3R5 2298 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 OR2J3O76001 311 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 RPL24P83731 157 aaKnown RBP11.81□□□□□ -0.52
CIITA-213ENST00000618327 FLYWCH2Q96CP2 140 aaKnown RBP11.81□□□□□ -0.52
CIITA-213ENST00000618327 TMEM222Q9H0R3 208 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 CALYQ9NYX4 217 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 E9PLN8 166 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 CRISP2P16562 243 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 FAM78BQ5VT40 261 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 HARBI1Q96MB7 349 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 VKORC1Q9BQB6 163 aa11.81□□□□□ -0.52
CIITA-213ENST00000618327 PTPRSQ13332 1948 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 H0Y980 276 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 H0YL77 283 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 IL18BPO95998 194 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
CIITA-213ENST00000618327 P2RY4P51582 365 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 ACP7Q6ZNF0 438 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 HES4Q9HCC6 221 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 PNRC2Q9NPJ4 139 aaKnown RBP11.8□□□□□ -0.52
CIITA-213ENST00000618327 OR5AL1P0C617 328 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 OPRK1P41145 380 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 STARD4Q96DR4 205 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 SOSTQ9BQB4 213 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 IGHV1-69-2A0A0G2JMI3 117 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 SULT1A1P50225 295 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 POC1AQ8NBT0 407 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 SLC25A22Q9H936 323 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 A0A1W2PN81 502 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 DYNLT3P51808 116 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 TCF15Q12870 199 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 LY6DQ14210 128 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 TMEM230Q96A57 120 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 OR1A1Q9P1Q5 309 aa11.8□□□□□ -0.52
CIITA-213ENST00000618327 DOCK7Q96N67 2140 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 PCNX1Q96RV3 2341 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 ZNF106Q9H2Y7 1883 aaKnown RBP11.79□□□□□ -0.52
CIITA-213ENST00000618327 M0QZK8 103 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 GGCTO75223 188 aaKnown RBP11.79□□□□□ -0.52
CIITA-213ENST00000618327 REG1BP48304 166 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 ATP6V1FQ16864 119 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 ZNF645Q8N7E2 425 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 LILRB1Q8NHL6 650 aaPredicted RBP11.79□□□□□ -0.52
CIITA-213ENST00000618327 SPTBN1Q01082 2364 aaKnown RBP11.79□□□□□ -0.52
CIITA-213ENST00000618327 ZNF253O75346 499 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 PGLYRP1O75594 196 aaPredicted RBP11.79□□□□□ -0.52
CIITA-213ENST00000618327 TNXAQ16473 311 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 ZNRF1Q8ND25 227 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 PRSS3P2Q8NHM4 247 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 COL4A3Q01955 1670 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 E9PQ18 207 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 MUC1P15941 1255 aaPredicted RBP11.79□□□□□ -0.52
CIITA-213ENST00000618327 WNT5AP41221 380 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 CDC34P49427 236 aaPredicted RBP11.79□□□□□ -0.52
CIITA-213ENST00000618327 GNG4P50150 75 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 SLC35E4Q6ICL7 350 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 OR10A7Q8NGE5 316 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 MISP3Q96FF7 219 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 TMEM147Q9BVK8 224 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 TIMM9Q9Y5J7 89 aa11.79□□□□□ -0.52
CIITA-213ENST00000618327 IGHV1-18A0A0C4DH31 117 aa11.78□□□□□ -0.52
CIITA-213ENST00000618327 BRS3P32247 399 aa11.78□□□□□ -0.52
CIITA-213ENST00000618327 ANKRD55Q3KP44 614 aa11.78□□□□□ -0.52
CIITA-213ENST00000618327 MYPOPQ86VE0 399 aaPredicted RBP11.78□□□□□ -0.52
CIITA-213ENST00000618327 LPAR2Q9HBW0 351 aa11.78□□□□□ -0.52
CIITA-213ENST00000618327 PRNDQ9UKY0 176 aa11.78□□□□□ -0.52
CIITA-213ENST00000618327 TNFSF18Q9UNG2 199 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms