RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 UNQ5815/PRO19632Q6UWF5 114 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 EEF1AKMT3Q96AZ1 226 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 SFXN3Q9BWM7 321 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 DSPPQ9NZW4 1301 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 LOC102724200A0A096LPH7 203 aaPredicted RBP9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 TMEM229AB2RXF0 380 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 TMEM30BQ3MIR4 351 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 OPN3Q9H1Y3 402 aaPredicted RBP9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 KBTBD11O94819 623 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 MMP16P51512 607 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 C1QL3Q5VWW1 255 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 FOXB2Q5VYV0 432 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 PMS2CLQ68D20 193 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 C2orf88Q9BSF0 95 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 SHANK1Q9Y566 2161 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 LOC107984156A0A0G2JMH3 177 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 DIRC3C9JPN6 131 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 ZNF345Q14585 488 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 ARL17AQ8IVW1 177 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 MSRB3Q8IXL7 192 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 OR4B1Q8NGF8 309 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 TMEM70Q9BUB7 260 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 PRR13Q9NZ81 148 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 IL36RNQ9UBH0 155 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 LINC00869P0C866 280 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 MPV17P39210 176 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 ZP4Q12836 540 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 COTL1Q14019 142 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 IBA57Q5T440 356 aaKnown RBP9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 IGKV3D-11A0A0A0MRZ8 115 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 PATE3B3GLJ2 98 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 FOXH1O75593 365 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 IGKV3-11P04433 115 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 CDX1P47902 265 aaPredicted RBP9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 OR4A47Q6IF82 309 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 HOGA1Q86XE5 327 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 KIR2DL4Q99706 377 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 QTRT1Q9BXR0 403 aaKnown RBP9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 NPFFO15130 113 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 GPX1P07203 203 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 DNLZQ5SXM8 178 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 LSM10Q969L4 123 aaKnown RBP9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 TMEM101Q96IK0 257 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 TXNDC17Q9BRA2 123 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 HIST1H4GQ99525 98 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 MRPL13Q9BYD1 178 aaKnown RBP9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 GPR61Q9BZJ8 451 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 OR4C45A6NMZ5 311 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 FCGR2BP31994 310 aaPredicted RBP9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 TRGC1P0CF51 173 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 PKIAP61925 76 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 CX3CL1P78423 397 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 ALKBH7Q9BT30 221 aaPredicted RBP9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 A0A1W2PPE3 182 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 MT-ND6P03923 174 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 FABP2P12104 132 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 PAPPA-AS1Q5QFB9 102 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 STPG2Q8N412 459 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 ZNF383Q8NA42 475 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 SGMS2Q8NHU3 365 aa9.67□□□□□ -0.86
CCDC144B-208ENST00000618081 CACNA1EQ15878 2313 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 FAM216AQ8WUB2 273 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 LMX1BO60663 402 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 LIPFP07098 398 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 NGFRP08138 427 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 SEC11BP0C7V7 166 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 ZNF56Q15929 161 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 C10orf128Q5T292 105 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 FOXD3Q9UJU5 478 aaPredicted RBP9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 FCGR3AP08637 254 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 ANOS1P23352 680 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 ZNF430Q9H8G1 570 aaPredicted RBP9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 PPIAL4CA0A0B4J2A2 164 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 PPIAL4GP0DN37 164 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 MVDP53602 400 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 TCF24Q7RTU0 167 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 TMEM45BQ96B21 275 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 ST6GALNAC2Q9UJ37 374 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 SPINT1O43278 529 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 GFRA3O60609 400 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 SMIM6P0DI80 62 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 PRR19A6NJB7 356 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 HCP5Q6MZN7 132 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 DNM1P46Q6ZS02 220 aa9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 MRPL24Q96A35 216 aaKnown RBP9.66□□□□□ -0.86
CCDC144B-208ENST00000618081 THY1P04216 161 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 BCL2P10415 239 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 GPR82Q96P67 336 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 LRRC3BQ96PB8 259 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 PRSS27Q9BQR3 290 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 IDI2-AS1Q9NZ38 188 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 TMEM262E9PQX1 116 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 OR2H2O95918 312 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 CD74P04233 296 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 STARD6P59095 220 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 MGAT2Q10469 447 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 C2orf83Q53S99 150 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 LTBP4Q8N2S1 1624 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 CLEC7AQ9BXN2 247 aa9.65□□□□□ -0.86
CCDC144B-208ENST00000618081 TNFSF18Q9UNG2 199 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms