RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 NUDT16L1Q9BRJ7 211 aaKnown RBP12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 FUT9Q9Y231 359 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 M0R143 59 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 ADAM20O43506 726 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 TMEM267Q0VDI3 215 aaPredicted RBP12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 PSG7Q13046 419 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 SPINK9Q5DT21 86 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 TMEM42Q69YG0 159 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 TMEM45BQ96B21 275 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 ASH1LQ9NR48 2969 aaKnown RBP12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 CD82P27701 267 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 TLE4Q04727 773 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 RTL6Q6ICC9 239 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 SCCPDHQ8NBX0 429 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 ELOVL1Q9BW60 279 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 HINT2Q9BX68 163 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 GOLT1BQ9Y3E0 138 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 C3orf85A0A1B0GTC6 90 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 A0A1B0GUS0 222 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 LMO1P25800 156 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 C16orf82Q7Z2V1 217 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 PCGF1Q9BSM1 259 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 VSIRQ9H7M9 311 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 TUBG2Q9NRH3 451 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 IGHV3OR15-7A0A075B7D8 119 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 ELLP55199 621 aaPredicted RBP12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 CD81P60033 236 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 TESK1Q15569 626 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 ZNF787Q6DD87 383 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 OR10J5Q8NHC4 309 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 C10orf35Q96D05 121 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 DYNLRB1Q9NP97 96 aa12.23□□□□□ -0.45
SHROOM1-208ENST00000617339 CYB5R3P00387 301 aaPredicted RBP12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 HERPUD1Q15011 391 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 CST9LP1Q5W188 147 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 ZCCHC24Q8N2G6 241 aaKnown RBP12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 OR5P3Q8WZ94 311 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 MSI2Q96DH6 328 aaKnown RBP12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 ATP23Q9Y6H3 246 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 MPPED1O15442 326 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 IAPPP10997 89 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 FAM90A2PQ658T7 463 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 ZNF573Q86YE8 665 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 KLF14Q8TD94 323 aaPredicted RBP12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 C18orf12Q96KH6 178 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 PLEKHF2Q9H8W4 249 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 ASCL3Q9NQ33 180 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 DLL3Q9NYJ7 618 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 TRAV24A0A0B4J272 114 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 A0A1B0GU03 582 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 A0A1B0GW64 132 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 TM4SF5O14894 197 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 FGF12P61328 243 aa12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 RELQ04864 619 aaPredicted RBP12.22□□□□□ -0.45
SHROOM1-208ENST00000617339 EPG5Q9HCE0 2579 aa12.21□□□□□ -0.45
SHROOM1-208ENST00000617339 IGKV1-6A0A0C4DH72 117 aa12.21□□□□□ -0.45
SHROOM1-208ENST00000617339 LOC102723971A0A1B0GUV8 181 aa12.21□□□□□ -0.45
SHROOM1-208ENST00000617339 PPP5D1E7EU14 171 aa12.21□□□□□ -0.45
SHROOM1-208ENST00000617339 CRYABP02511 175 aaKnown RBP12.21□□□□□ -0.45
SHROOM1-208ENST00000617339 SERPINE2P07093 398 aa12.21□□□□□ -0.45
SHROOM1-208ENST00000617339 WDR86Q86TI4 376 aa12.21□□□□□ -0.45
SHROOM1-208ENST00000617339 MRGPRDQ8TDS7 321 aa12.21□□□□□ -0.45
SHROOM1-208ENST00000617339 SMDT1Q9H4I9 107 aa12.21□□□□□ -0.45
SHROOM1-208ENST00000617339 RAXQ9Y2V3 346 aa12.21□□□□□ -0.45
SHROOM1-208ENST00000617339 MRPS18CQ9Y3D5 142 aaKnown RBP12.21□□□□□ -0.45
SHROOM1-208ENST00000617339 CCDC168Q8NDH2 2452 aa12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 MARCH11A6NNE9 402 aa12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 CHST1O43916 411 aa12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 FAM27E3Q08E93 113 aa12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 ZNF718Q3SXZ3 478 aa12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 OR5A2Q8NGI9 324 aa12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 GMPPAQ96IJ6 420 aaPredicted RBP12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 SMIM7Q9BQ49 75 aa12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 TMEM208Q9BTX3 173 aa12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 RTL8AQ9BWD3 113 aa12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 AURKAIP1Q9NWT8 199 aaPredicted RBP12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 KCNIP1Q9NZI2 227 aa12.21□□□□□ -0.46
SHROOM1-208ENST00000617339 PITX3O75364 302 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 TMEM50AO95807 157 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 OR2H2O95918 312 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 CEACAM6P40199 344 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 NUBP1P53384 320 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 RBPJQ06330 500 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 DAZAP2Q15038 168 aaPredicted RBP12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 LINC00470Q9BZP3 86 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 KIR2DL2P43627 348 aaPredicted RBP12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 GNB2P62879 340 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 COLCA1Q6ZS62 124 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 PLPPR1Q8TBJ4 325 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 GNG12Q9UBI6 72 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 DLL1O00548 723 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 PSG2P11465 335 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 GZMHP20718 246 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 ECI1P42126 302 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 DMRTA1Q5VZB9 504 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 OR4D5Q8NGN0 318 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 RPRMQ9NS64 109 aa12.2□□□□□ -0.46
SHROOM1-208ENST00000617339 SMPD2O60906 423 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 HBE1P02100 147 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 OPN1MWP04001 364 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms