RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 SCN3AQ9NY46 2000 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 BTCP35070 178 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 PPP1CCP36873 323 aaKnown RBP12.61□□□□□ -0.39
SNPH-203ENST00000614659 ATP5IP56385 69 aaPredicted RBP12.61□□□□□ -0.39
SNPH-203ENST00000614659 ZNF343Q6P1L6 599 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 C16orf82Q7Z2V1 217 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 GALNT14Q96FL9 552 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 NINQ8N4C6 2090 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 ZNF205O95201 554 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 VN1R17PQ8TDU5 208 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 GPR146Q96CH1 333 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 PSMG3Q9BT73 122 aaPredicted RBP12.61□□□□□ -0.39
SNPH-203ENST00000614659 COA4Q9NYJ1 87 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 A0A0B4J293 547 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 K7ERU9 68 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 GCGP01275 180 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 HARBI1Q96MB7 349 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 ZNF488Q96MN9 340 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 JPT1Q9UK76 154 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 ZNF646O15015 1829 aaPredicted RBP12.61□□□□□ -0.39
SNPH-203ENST00000614659 CCL1P22362 96 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 EIF4E3Q8N5X7 224 aaKnown RBP12.61□□□□□ -0.39
SNPH-203ENST00000614659 HSPB8Q9UJY1 196 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 THSD7BQ9C0I4 1608 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 ARID1BQ8NFD5 2236 aaPredicted RBP12.61□□□□□ -0.39
SNPH-203ENST00000614659 HELTA6NFD8 242 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 K7N7A8 449 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 PTGDSP41222 190 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 TCL1AP56279 114 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 OR5P3Q8WZ94 311 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 IMMP1LQ96LU5 166 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 PCGF1Q9BSM1 259 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 RBKSQ9H477 322 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 SRD5A3Q9H8P0 318 aa12.61□□□□□ -0.39
SNPH-203ENST00000614659 CARHSP1Q9Y2V2 147 aaKnown RBP12.61□□□□□ -0.39
SNPH-203ENST00000614659 FOXL2P58012 376 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 MSRB2Q9Y3D2 182 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 hCG_38984A0A1B0GV85 526 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 J3QR06 171 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 BPIFA4PQ86YQ2 179 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 TAF15Q92804 592 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNPH-203ENST00000614659 OR2V2Q96R30 315 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 C9orf172C9J069 976 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 DIRC3C9JPN6 131 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 APCSP02743 223 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 MC5RP33032 325 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 ZNF362Q5T0B9 420 aaPredicted RBP12.6□□□□□ -0.39
SNPH-203ENST00000614659 MUC15Q8N387 334 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 CYB561D1Q8N8Q1 229 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 TRBV23-1A0A0A0MS06 115 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 SNURFLB1AK76 121 aa12.6□□□□□ -0.39
SNPH-203ENST00000614659 IER3P46695 156 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 CCL8P80075 99 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 OR1B1Q8NGR6 318 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 OR1L1Q8NH94 360 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 NAGKQ9UJ70 344 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 HIST1H1EP10412 219 aaKnown RBP12.59□□□□□ -0.39
SNPH-203ENST00000614659 ZNF708P17019 499 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 Q5BKY6 102 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 E9PLN8 166 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 MT-ND6P03923 174 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 LYZP61626 148 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 VKORC1Q9BQB6 163 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 TNFRSF19Q9NS68 423 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 PIKFYVEQ9Y2I7 2098 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 A0A1B0GTI1 187 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 OR2T8A6NH00 312 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 A8MXK9 166 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 ZNF385CQ66K41 422 aaPredicted RBP12.59□□□□□ -0.39
SNPH-203ENST00000614659 DYNLRB2Q8TF09 96 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 WASHC3Q9Y3C0 194 aa12.59□□□□□ -0.39
SNPH-203ENST00000614659 CORTO00230 105 aa12.58□□□□□ -0.39
SNPH-203ENST00000614659 PRSS1P07477 247 aa12.58□□□□□ -0.39
SNPH-203ENST00000614659 CSN3P07498 182 aa12.58□□□□□ -0.39
SNPH-203ENST00000614659 MPV17P39210 176 aa12.58□□□□□ -0.39
SNPH-203ENST00000614659 SELENOTP62341 195 aa12.58□□□□□ -0.39
SNPH-203ENST00000614659 MEF2BQ02080 365 aaPredicted RBP12.58□□□□□ -0.39
SNPH-203ENST00000614659 RIGQ13278 110 aa12.58□□□□□ -0.39
SNPH-203ENST00000614659 SLC35E4Q6ICL7 350 aa12.58□□□□□ -0.39
SNPH-203ENST00000614659 MRPL54Q6P161 138 aaKnown RBP12.58□□□□□ -0.39
SNPH-203ENST00000614659 JMJD8Q96S16 334 aa12.58□□□□□ -0.39
SNPH-203ENST00000614659 NPIPB7O75200 414 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 PCP4P48539 62 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 NR2C2APQ86WQ0 139 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 DOK5Q9P104 306 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 P01737 135 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 ORM2P19652 201 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 TMEM116Q8NCL8 245 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 ZNF738Q8NE65 137 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 SSMEM1Q8WWF3 244 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 C1QTNF5Q9BXJ0 243 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 MRPL13Q9BYD1 178 aaKnown RBP12.58□□□□□ -0.4
SNPH-203ENST00000614659 PXMP4Q9Y6I8 212 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 MTCL1Q9Y4B5 1905 aaKnown RBP12.58□□□□□ -0.4
SNPH-203ENST00000614659 TRIOBPQ9H2D6 2365 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 KNL1Q8NG31 2342 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 ISLRO14498 428 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 ZNF788Q6ZQV5 615 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 OR52M1Q8NGK5 317 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms