RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 OR4D5Q8NGN0 318 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 ZNF296Q8WUU4 475 aaPredicted RBP7.65□□□□□ -1.18
TTC28-208ENST00000612946 WNT5BQ9H1J7 359 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 B4GALT1P15291 398 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 YRDCQ86U90 279 aaKnown RBP7.65□□□□□ -1.19
TTC28-208ENST00000612946 C10orf111Q8N326 155 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 SF3B5Q9BWJ5 86 aaKnown RBP7.65□□□□□ -1.19
TTC28-208ENST00000612946 J3QR06 171 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 GJB3O75712 270 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 LRTM2Q8N967 370 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 DLX4Q92988 240 aaPredicted RBP7.65□□□□□ -1.19
TTC28-208ENST00000612946 MRGPRFQ96AM1 343 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 C5orf66Q9H5L9 145 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 RAXQ9Y2V3 346 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 ARHGAP32A7KAX9 2087 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 PPBPP02775 128 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 CBLN1P23435 193 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 TDGF1P3P51864 188 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 MISP3Q96FF7 219 aa7.65□□□□□ -1.19
TTC28-208ENST00000612946 GZMHP20718 246 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 RCC1LQ96I51 464 aaKnown RBP7.64□□□□□ -1.19
TTC28-208ENST00000612946 TMEM131Q92545 1883 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 A0A1W2PPC1 479 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 A8MWP6 167 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 C3orf80F5H4A9 247 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 CLDN14O95500 239 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 CD40P25942 277 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 CEACAM3P40198 252 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 SSBP2P81877 361 aaPredicted RBP7.64□□□□□ -1.19
TTC28-208ENST00000612946 PGLYRP3Q96LB9 341 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 G6PC2Q9NQR9 355 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 GAGE12BA1L429 117 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 CDC42EP2O14613 210 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 VSIG8P0DPA2 414 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 ZNF77Q15935 545 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 TCTN1Q2MV58 587 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 CLLU1OSQ5K130 101 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 SPEM1Q8N4L4 309 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 FMC1Q96HJ9 113 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 C14orf144Q96I85 54 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 KIR2DL4Q99706 377 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 CTLA4P16410 223 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 UNQ9370/PRO34162Q6UXP9 181 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 ASAH2BP0C7U1 165 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 RHOGP84095 191 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 FUT5Q11128 374 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 DCAF12Q5T6F0 453 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 FER1L6-AS2Q96M78 137 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 ATP6V0BQ99437 205 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 NPIPB13A6NJU9 1138 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 NPIPB4C9JG80 1138 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 DNASE2BQ8WZ79 361 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 H1FXQ92522 213 aaKnown RBP7.64□□□□□ -1.19
TTC28-208ENST00000612946 LYZP61626 148 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 OR4X1Q8NH49 305 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 MED19A0JLT2 244 aaPredicted RBP7.64□□□□□ -1.19
TTC28-208ENST00000612946 IDSB3KWA1 339 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 FOXL1Q12952 345 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 ZNF418Q8TF45 676 aaPredicted RBP7.64□□□□□ -1.19
TTC28-208ENST00000612946 TMEM40Q8WWA1 233 aa7.64□□□□□ -1.19
TTC28-208ENST00000612946 IGHV2-70P01814 119 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 CD38P28907 300 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 LIMS1P48059 325 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 OR8B12Q8NGG6 310 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 HCFC1P51610 2035 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 A0A0G2JLM5 398 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 MC5RP33032 325 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 AGMATQ9BSE5 352 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 EMC6Q9BV81 110 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 H3BUT2 72 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 TPTE2P1Q5T6R2 138 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 SSMEM1Q8WWF3 244 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 RNF222A6NCQ9 220 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 LILRA5A6NI73 299 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 OR9G9P0C7N8 305 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 THSD4Q6ZMP0 1018 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 TMEM186Q96B77 213 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 GLRX2Q9NS18 164 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 DYSFO75923 2080 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 ZNF865P0CJ78 1059 aaPredicted RBP7.63□□□□□ -1.19
TTC28-208ENST00000612946 RBM11P57052 281 aaKnown RBP7.63□□□□□ -1.19
TTC28-208ENST00000612946 INSM1Q01101 510 aaPredicted RBP7.63□□□□□ -1.19
TTC28-208ENST00000612946 CDKN3Q16667 212 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 ASCL5Q7RTU5 278 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 TRAV8-7A0A075B6U6 113 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 GRIFINA4D1Z8 144 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 FCGR3AP08637 254 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 ZNF260Q3ZCT1 412 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 C1orf185Q5T7R7 199 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 TSPO2Q5TGU0 170 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 A0A1B0GTL3 188 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 SPANXN1Q5VSR9 72 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 SYNGR1O43759 233 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 ZNF708P17019 499 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 SDF2L1Q9HCN8 221 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 MED29Q9NX70 200 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 DLL1O00548 723 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 OTX1P32242 354 aaPredicted RBP7.63□□□□□ -1.19
TTC28-208ENST00000612946 NUBP1P53384 320 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 CENPWQ5EE01 88 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms