RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ZNF843Q8N446 348 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 DEFB125Q8N687 156 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 KRTCAP2Q8N6L1 136 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 NPWQ8N729 165 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF709Q8N972 641 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 OR52R1Q8NGF1 315 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 MFSD8Q8NHS3 518 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 AQP10Q96PS8 301 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 EFCAB11Q9BUY7 163 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 SHROOM3Q8TF72 1996 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 TMEM189A5PLL7 270 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 J3QR89 54 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 PRRG2O14669 202 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 ATP6V0CP27449 155 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 EIF2B1Q14232 305 aaKnown RBP4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 PRR31Q5SQ13 230 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 DNM1P46Q6ZS02 220 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 RDH5Q92781 318 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 SLC25A38Q96DW6 304 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF681Q96N22 645 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 TRIB3Q96RU7 358 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF581Q9P0T4 197 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 COL4A3Q01955 1670 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 KIR2DS5A0A0G2JLQ3 304 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 A0A0G2JNG1 304 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 PPP1R3DO95685 299 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 HBE1P02100 147 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 MYOD1P15172 320 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 CD34P28906 385 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 MDH2P40926 338 aaKnown RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 GDF5P43026 501 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 UBE2E1P51965 193 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 DLX6P56179 175 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 TPPP2P59282 170 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 PSG9Q00887 426 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 KIR2DS5Q14953 304 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 LEG1Q6P5S2 330 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF788Q6ZQV5 615 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 FA2HQ7L5A8 372 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 KIR3DL3Q8N743 410 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 FNDC9Q8TBE3 224 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 STAG3L4Q8TBR4 150 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 DCUN1D4Q92564 292 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 UBE2E3Q969T4 207 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 UBE2E2Q96LR5 201 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 NIPSNAP3BQ9BS92 247 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 SLC25A39Q9BZJ4 359 aaPredicted RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 SPRY4Q9C004 299 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 ATG2AQ2TAZ0 1938 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 TDRD15B5MCY1 1934 aaKnown RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 OR2T8A6NH00 312 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 FAM72CH0Y354 149 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 C1QL1O75973 258 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 CLDN1O95832 211 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 HLA-DQB2P05538 268 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 GATA1P15976 413 aaPredicted RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 TCN2P20062 427 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 HOXD3P31249 432 aaPredicted RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF83P51522 516 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 CRYBA2P53672 197 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 LIM2P55344 173 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 RHOBP62745 196 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 MEF2BQ02080 365 aaPredicted RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 HIST1H1AQ02539 215 aaPredicted RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 ANXA2RQ3ZCQ2 193 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 FAM72AQ5TYM5 149 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 FAM72DQ6L9T8 149 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 FOXI2Q6ZQN5 318 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 FAM72BQ86X60 149 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 OR4N5Q8IXE1 308 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 TMEM86BQ8N661 226 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 EEF1AKMT3Q96AZ1 226 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 CABLES2Q9BTV7 478 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 VN1R1Q9GZP7 353 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 POLR2J3Q9H1A7 115 aaKnown RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 SIGLEC9Q9Y336 463 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 LSM5Q9Y4Y9 91 aaKnown RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 MCM3APO60318 1980 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 A0A087WX48 190 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 CEACAM18A8MTB9 384 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 MT-CO3P00414 261 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 NRASP01111 189 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 CYBAP13498 195 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 GUCA1AP43080 201 aaPredicted RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 GPM6AP51674 278 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 CLDN17P56750 224 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 PFN3P60673 137 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 CYCSP99999 105 aaKnown RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 FAM231DQ6ZW35 169 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 HSD11B1LQ7Z5J1 315 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 BCDIN3DQ7Z5W3 292 aaKnown RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 DOK4Q8TEW6 326 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 APOBEC3DQ96AK3 386 aaPredicted RBP4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 SEC22AQ96IW7 307 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 NDFIP1Q9BT67 221 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 NMES1Q9C002 83 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 POPDC3Q9HBV1 291 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms