RNA–Protein interactions for RNA: ENST00000602015.5

FARP1-238, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-238	ENST00000602015	DDI2	Q5TDH0	399 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	PYHIN1	Q6K0P9	492 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	DNM1P34	Q6PK57	102 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	CD200R1L	Q6Q8B3	271 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	DHRS11	Q6UWP2	260 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	OAF	Q86UD1	273 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	ANGPTL5	Q86XS5	388 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	ZDHHC21	Q8IVQ6	265 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	MSRB3	Q8IXL7	192 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	ELMOD2	Q8IZ81	293 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	SPATA4	Q8NEY3	305 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	OR1B1	Q8NGR6	318 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	OR2T10	Q8NGZ9	312 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	OR51A7	Q8NH64	312 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	OR4A16	Q8NH70	328 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	OR9G1	Q8NH87	305 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	RNASE8	Q8TDE3	154 aa	Known RBP	2.58	□□□□□ -2
FARP1-238	ENST00000602015	HAVCR2	Q8TDQ0	301 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	RASSF5	Q8WWW0	418 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	FAM46B	Q96A09	425 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	RCN3	Q96D15	328 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	RASL11B	Q9BPW5	248 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	GAL3ST2	Q9H3Q3	398 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	C5orf66	Q9H5L9	145 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	AIG1	Q9NVV5	245 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	MRPL22	Q9NWU5	206 aa	Known RBP	2.58	□□□□□ -2
FARP1-238	ENST00000602015	SLC25A37	Q9NYZ2	338 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	ZNF319	Q9P2F9	582 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	CD300A	Q9UGN4	299 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	SLC22A13	Q9Y226	551 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	PIGL	Q9Y2B2	252 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	2.58	□□□□□ -2
FARP1-238	ENST00000602015	NUBP2	Q9Y5Y2	271 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	SAR1B	Q9Y6B6	198 aa		2.58	□□□□□ -2
FARP1-238	ENST00000602015	LPA	P08519	4548 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	TRAV41	A0A0B4J266	112 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	IGHV1-3	A0A0C4DH29	117 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	TMEM120B	A0PK00	339 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015		J3QT63	122 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	CDC42EP2	O14613	210 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	CCS	O14618	274 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	MAGEB3	O15480	346 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	AIRE	O43918	545 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	OR2A4	O95047	310 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	MOS	P00540	346 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	HLA-DRB1	P01911	266 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	APOC1	P02654	83 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	SLC2A1	P11166	492 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	CTRB1	P17538	263 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	PPIB	P23284	216 aa	Known RBP	2.57	□□□□□ -2
FARP1-238	ENST00000602015	VHL	P40337	213 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	OR1E2	P47887	323 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	CAMLG	P49069	296 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	APOC4	P55056	127 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	KRR1	Q13601	381 aa	Known RBP	2.57	□□□□□ -2
FARP1-238	ENST00000602015	EIF2B1	Q14232	305 aa	Known RBP	2.57	□□□□□ -2
FARP1-238	ENST00000602015	SPHAR	Q15513	63 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	TATDN3	Q17R31	274 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	ZBED5	Q49AG3	693 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	TEX30	Q5JUR7	227 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	PRAMEF5	Q5TYX0	476 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	CTRB2	Q6GPI1	263 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	HAGHL	Q6PII5	290 aa	Predicted RBP	2.57	□□□□□ -2
FARP1-238	ENST00000602015	DPY19L2P2	Q6ZN68	376 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	SPATA12	Q7Z6I5	190 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	ZNF573	Q86YE8	665 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	STH	Q8IWL8	128 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	RNF148	Q8N7C7	305 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	YIPF7	Q8N8F6	280 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	ASCC1	Q8N9N2	400 aa	Known RBP	2.57	□□□□□ -2
FARP1-238	ENST00000602015	OR13C5	Q8NGS8	318 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	UBALD1	Q8TB05	177 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	AGR3	Q8TD06	166 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	PIGC	Q92535	297 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	ZNF488	Q96MN9	340 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	NEDD4L	Q96PU5	975 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	SPACA5	Q96QH8	159 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	2.57	□□□□□ -2
FARP1-238	ENST00000602015	MGAT4A	Q9UM21	535 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	COPS3	Q9UNS2	423 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	SLC7A11	Q9UPY5	501 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	POLDIP2	Q9Y2S7	368 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	KLHDC2	Q9Y2U9	406 aa		2.57	□□□□□ -2
FARP1-238	ENST00000602015	TRGV10	A0A0A0MS01	117 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	IGHV7-81	A0A0B4J1V7	117 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	FUOM	A2VDF0	154 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	EFCAB9	A8MZ26	197 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	ARPC3	O15145	178 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	ZNF253	O75346	499 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	MT-ND2	P03891	347 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	GAPDH	P04406	335 aa	Known RBP	2.56	□□□□□ -2
FARP1-238	ENST00000602015	TROVE2	P10155	538 aa	Known RBP eCLIP	2.56	□□□□□ -2
FARP1-238	ENST00000602015	IFI30	P13284	250 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	NCK1	P16333	377 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	DUT	P33316	252 aa	Known RBP	2.56	□□□□□ -2
FARP1-238	ENST00000602015	PRKX	P51817	358 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	SYNJ2BP	P57105	145 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	FXYD6P3	P58550	94 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	TAS2R41	P59536	307 aa		2.56	□□□□□ -2
FARP1-238	ENST00000602015	CDC42	P60953	191 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms