RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 FAM25EA8MYX2 175 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 C22orf46C9J442 243 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 PSPNO60542 156 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 OR5AC1P0C628 307 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 PET100P0DJ07 73 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 MMP9P14780 707 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 RCC1P18754 421 aaPredicted RBP10.4□□□□□ -0.74
SCAF1-202ENST00000595242 GNRHRP30968 328 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 CD69Q07108 199 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 CLLU1Q5K131 121 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 WDR25Q64LD2 544 aaPredicted RBP10.4□□□□□ -0.74
SCAF1-202ENST00000595242 ACOT7LQ6ZUV0 252 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 SLC51BQ86UW2 128 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 SLC7A5P1Q8MH63 180 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 LGI3Q8N145 548 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 OR5T2Q8NGG2 359 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 GLYATL2Q8WU03 294 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 LRRC29Q8WV35 223 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 OR10C1Q96KK4 312 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 RNF126Q9BV68 326 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 ARL6Q9H0F7 186 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 METTL8Q9H825 291 aaKnown RBP10.4□□□□□ -0.74
SCAF1-202ENST00000595242 PRR13Q9NZ81 148 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 MBD2Q9UBB5 411 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 VPREB3Q9UKI3 123 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 OR2W1Q9Y3N9 320 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 SACSQ9NZJ4 4579 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 IGKV1D-13A0A0B4J2D9 117 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 C13orf42A0A1B0GVH6 325 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 DUXBA0A1W2PPF3 345 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 BTBD17A6NE02 478 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 MPTX1A8MV57 137 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 H0YIZ8 118 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 BET1O15155 118 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 MPPED1O15442 326 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 BCL2L11O43521 198 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 CYB5R3P00387 301 aaPredicted RBP10.39□□□□□ -0.75
SCAF1-202ENST00000595242 CFDP00746 253 aaPredicted RBP10.39□□□□□ -0.75
SCAF1-202ENST00000595242 LHBP01229 141 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 IFNA21P01568 189 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 IGKV1-13P0DP09 117 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 OR3A1P47881 315 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 MSMO1Q15800 293 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 PHLDA2Q53GA4 152 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 GGNBP1Q5YKI7 109 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 LYG1Q8N1E2 194 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 GCSAMQ8N6F7 178 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 ZNF565Q8N9K5 539 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 BVESQ8NE79 360 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 OR11L1Q8NGX0 322 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 OR10J5Q8NHC4 309 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 LHX4Q969G2 390 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 ERGIC1Q969X5 290 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 KIRREL1Q96J84 757 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 TMEM56Q96MV1 263 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 SLC5A7Q9GZV3 580 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 TMEM222Q9H0R3 208 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 DNAJB11Q9UBS4 358 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 SIGLEC9Q9Y336 463 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 TMEM56-RWDD3S4R434 201 aa10.39□□□□□ -0.75
SCAF1-202ENST00000595242 C3orf85A0A1B0GTC6 90 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 LINC00862A6NCI5 91 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 ZNF737O75373 536 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 LIPFP07098 398 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 HOXB5P09067 269 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 UCP1P25874 307 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 ATXN7L3Q14CW9 347 aaPredicted RBP10.38□□□□□ -0.75
SCAF1-202ENST00000595242 TRAT1Q6PIZ9 186 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 LYPD2Q6UXB3 125 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 ZNF841Q6ZN19 808 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 ZNF818PQ6ZRF7 136 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 C5orf24Q7Z6I8 188 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 PIP4P2Q8N4L2 257 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 Q8TCH9 128 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 IL22RA2Q969J5 263 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 COQ2Q96H96 371 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 AKR1E2Q96JD6 320 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 AQP10Q96PS8 301 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 TP53RKQ96S44 253 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 NCOR1P1Q9H4R4 102 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 UFSP2Q9NUQ7 469 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 OR14J1Q9UGF5 321 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 TRAPPC2LQ9UL33 140 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 FAM96BQ9Y3D0 163 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 TMED3Q9Y3Q3 217 aa10.38□□□□□ -0.75
SCAF1-202ENST00000595242 PIGBOS1A0A0B4J2F0 54 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 IGHV3-64DA0A0J9YX35 117 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 hCG_1807616A0A1W2PRN6 198 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 OOEPA6NGQ2 149 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 H0Y980 276 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 RNASEK-C17orf49H0YIS7 233 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 CEBPDP49716 269 aaPredicted RBP10.37□□□□□ -0.75
SCAF1-202ENST00000595242 RAB32Q13637 225 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 IAH1Q2TAA2 248 aaPredicted RBP10.37□□□□□ -0.75
SCAF1-202ENST00000595242 NSUN5P1Q3KNT7 163 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 LRRC37A5PQ49AS3 106 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 C6orf183Q5T699 404 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 C1orf122Q6ZSJ8 110 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 TBC1D26Q86UD7 250 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 PDZD9Q8IXQ8 264 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms