RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 IDH3GP51553 393 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 SCCPDHQ8NBX0 429 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 OR10P1Q8NGE3 313 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 B4GALT7Q9UBV7 327 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 POLDIP2Q9Y2S7 368 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 DOCK7Q96N67 2140 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 ODAMA1E959 279 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 LCN2P80188 198 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 CT55Q8WUE5 264 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 CLUHP3Q96NS8 147 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 NPCDR1Q9BY65 106 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 CLN8Q9UBY8 286 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 USF3Q68DE3 2245 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 SH2D1BO14796 132 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 PAGE4O60829 102 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 MT-CO3P00414 261 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 KRASP01116 189 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 G6PCP35575 357 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 TLE1Q04724 770 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 HNF4GQ14541 408 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 DCAF12Q5T6F0 453 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 NUFIP2Q7Z417 695 aaKnown RBP12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 TMEM37Q8WXS4 190 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 TMEM18Q96B42 140 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 FUT9Q9Y231 359 aa12.48□□□□□ -0.41
SMARCA4-219ENST00000592604 RPL30P62888 115 aaKnown RBP12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 C5orf30Q96GV9 206 aa12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 DOCK11Q5JSL3 2073 aa12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 J3QW42 95 aa12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 MLNRO43193 412 aa12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 NPPCP23582 126 aa12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 CCKARP32238 428 aa12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 TFF3Q07654 80 aa12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 CLEC12BQ2HXU8 276 aa12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 C6orf15Q6UXA7 325 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 MYPOPQ86VE0 399 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 THOC3Q96J01 351 aaKnown RBP12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 CIB3Q96Q77 187 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 DIRC2Q96SL1 478 aa12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 RNF24Q9Y225 148 aa12.47□□□□□ -0.41
SMARCA4-219ENST00000592604 ZG16O60844 167 aa12.46□□□□□ -0.41
SMARCA4-219ENST00000592604 CD99P14209 185 aa12.46□□□□□ -0.41
SMARCA4-219ENST00000592604 TMEM249Q2WGJ8 235 aa12.46□□□□□ -0.41
SMARCA4-219ENST00000592604 DMRTA1Q5VZB9 504 aa12.46□□□□□ -0.41
SMARCA4-219ENST00000592604 KCNIP4Q6PIL6 250 aa12.46□□□□□ -0.41
SMARCA4-219ENST00000592604 BCL2L2Q92843 193 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-219ENST00000592604 DNAJC13O75165 2243 aa12.46□□□□□ -0.41
SMARCA4-219ENST00000592604 ZNF705GA8MUZ8 300 aaPredicted RBP12.46□□□□□ -0.42
SMARCA4-219ENST00000592604 RAB29O14966 203 aa12.46□□□□□ -0.42
SMARCA4-219ENST00000592604 BRWD1-AS2P59051 145 aa12.46□□□□□ -0.42
SMARCA4-219ENST00000592604 GNB2P62879 340 aa12.46□□□□□ -0.42
SMARCA4-219ENST00000592604 MRPS11P82912 194 aaKnown RBP12.46□□□□□ -0.42
SMARCA4-219ENST00000592604 SPATA46Q5T0L3 261 aa12.46□□□□□ -0.42
SMARCA4-219ENST00000592604 ZNF709Q8N972 641 aa12.46□□□□□ -0.42
SMARCA4-219ENST00000592604 OR1L1Q8NH94 360 aa12.46□□□□□ -0.42
SMARCA4-219ENST00000592604 C22orf15Q8WYQ4 148 aa12.46□□□□□ -0.42
SMARCA4-219ENST00000592604 OR2D2Q9H210 308 aa12.46□□□□□ -0.42
SMARCA4-219ENST00000592604 KCNIP1Q9NZI2 227 aa12.46□□□□□ -0.42
SMARCA4-219ENST00000592604 TMPRSS2O15393 492 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 DLEU1O43261 78 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 NXPH2O95156 264 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 MAGEA5P43359 124 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 CATR1Q13166 79 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 SLC10A1Q14973 349 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 TCTEX1D1Q8N7M0 179 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 GALMQ96C23 342 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 C11orf94C9JXX5 98 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 C17orf112F2Z3M2 114 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 S1PR2O95136 353 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 CLDN14O95500 239 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 S100A7P31151 101 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 RBX1P62877 108 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 PMP22Q01453 160 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 ZNF816Q0VGE8 651 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 BTF3L4Q96K17 158 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 IMMP2LQ96T52 175 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 HES7Q9BYE0 225 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 TTTY12Q9BZ98 90 aa12.45□□□□□ -0.42
SMARCA4-219ENST00000592604 FAM166BA8MTA8 275 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 CDIPTO14735 213 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 CNN1P51911 297 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 RPL15P61313 204 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 ZXDAP98168 799 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 MDP1Q86V88 176 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 GBGT1Q8N5D6 347 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 Q8N7P7 452 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 NANOS1Q8WY41 292 aaKnown RBP12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 TMEM208Q9BTX3 173 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 DDA1Q9BW61 102 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 TMEM30CPA0ZSE6 113 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 C17orf98A8MV24 154 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 C1QTNF9BB2RNN3 333 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 PATE3B3GLJ2 98 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 OR3A1P47881 315 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 CDC34P49427 236 aaPredicted RBP12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 ZNF766Q5HY98 468 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 PEAR1Q5VY43 1037 aaPredicted RBP12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 TMEM144Q7Z5S9 345 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 LINC01551Q86U37 167 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 C12orf77C9JDV5 145 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms