RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 LINC00473A8K010 186 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 SCAF4O95104 1147 aaKnown RBP12.67□□□□□ -0.38
MBD1-217ENST00000588937 CYB5R3P00387 301 aaPredicted RBP12.67□□□□□ -0.38
MBD1-217ENST00000588937 HPRT1P00492 218 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 CGB3P0DN86 165 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 CGB7P0DN87 165 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 PPT1P50897 306 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 LOXL3P58215 753 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 BSPH1Q075Z2 132 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 ATP6V1FQ16864 119 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 FAM74A3Q4VXF1 159 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 TEX36Q5VZQ5 186 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 DHRS7BQ6IAN0 325 aaPredicted RBP12.67□□□□□ -0.38
MBD1-217ENST00000588937 TMEM14EPQ6UXP3 125 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 THNSL2Q86YJ6 484 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 ZNF525Q8N782 197 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 CLRN3Q8NCR9 226 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 ZCCHC14Q8WYQ9 949 aaKnown RBP12.67□□□□□ -0.38
MBD1-217ENST00000588937 PRELID3BQ9Y3B1 194 aa12.67□□□□□ -0.38
MBD1-217ENST00000588937 KBTBD11-OT1A0A1B0GTJ5 212 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 C17orf100A8MU93 164 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 C9JQL5 133 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 RBFOX2O43251 390 aaKnown RBP eCLIP12.66□□□□□ -0.38
MBD1-217ENST00000588937 OR4A8P0C604 315 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 RUNX1Q01196 453 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 ADIPOQQ15848 244 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 KDF1Q8NAX2 398 aaPredicted RBP12.66□□□□□ -0.38
MBD1-217ENST00000588937 RBMXL1Q96E39 390 aaKnown RBP12.66□□□□□ -0.38
MBD1-217ENST00000588937 SCRT1Q9BWW7 348 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 EGLN1Q9GZT9 426 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 CLN8Q9UBY8 286 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 TPRP12270 2363 aaKnown RBP12.66□□□□□ -0.38
MBD1-217ENST00000588937 ACACBO00763 2458 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 MEX3AA1L020 520 aaKnown RBP12.66□□□□□ -0.38
MBD1-217ENST00000588937 NKX6-3A6NJ46 265 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 MARCH11A6NNE9 402 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 RBMXL2O75526 392 aaKnown RBP12.66□□□□□ -0.38
MBD1-217ENST00000588937 THBDP07204 575 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 SERF2P84101 59 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 C17orf58Q2M2W7 97 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 LRRC75BQ2VPJ9 315 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 FAM201AQ5SY85 155 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 ZNF788Q6ZQV5 615 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.66□□□□□ -0.38
MBD1-217ENST00000588937 R3HDM4Q96D70 268 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 GAFA1Q96PS6 74 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 VKORC1Q9BQB6 163 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 SLC35B3Q9H1N7 401 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 PRORYQ9H606 182 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 GFOD1Q9NXC2 390 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 KIAA1456Q9P272 454 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 FBXO7Q9Y3I1 522 aa12.66□□□□□ -0.38
MBD1-217ENST00000588937 ZNF729A6NN14 1252 aaPredicted RBP12.65□□□□□ -0.38
MBD1-217ENST00000588937 M0R1X1 148 aa12.65□□□□□ -0.38
MBD1-217ENST00000588937 PPIHO43447 177 aaKnown RBP12.65□□□□□ -0.38
MBD1-217ENST00000588937 FAM87AP0C7U9 286 aa12.65□□□□□ -0.38
MBD1-217ENST00000588937 NPBWR1P48145 328 aa12.65□□□□□ -0.38
MBD1-217ENST00000588937 SLC38A11Q08AI6 406 aa12.65□□□□□ -0.38
MBD1-217ENST00000588937 ARL16Q0P5N6 197 aa12.65□□□□□ -0.38
MBD1-217ENST00000588937 NCR3LG1Q68D85 454 aa12.65□□□□□ -0.38
MBD1-217ENST00000588937 C1orf87Q8N0U7 546 aa12.65□□□□□ -0.38
MBD1-217ENST00000588937 DTD1Q8TEA8 209 aa12.65□□□□□ -0.38
MBD1-217ENST00000588937 ABHD14AQ9BUJ0 271 aa12.65□□□□□ -0.38
MBD1-217ENST00000588937 RFNGQ9Y644 331 aa12.65□□□□□ -0.38
MBD1-217ENST00000588937 TRAV38-1A0A0B4J264 116 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 FCGR3BO75015 233 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 F12P00748 615 aaPredicted RBP12.64□□□□□ -0.39
MBD1-217ENST00000588937 GYPAP02724 150 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 CASP6P55212 293 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 ERVK-16P61578 105 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 PRR30Q53SZ7 412 aaPredicted RBP12.64□□□□□ -0.39
MBD1-217ENST00000588937 SPSB3Q6PJ21 355 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 HAPLN4Q86UW8 402 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 DEFB108BQ8NET1 73 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 CORO2AQ92828 525 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 PINX1Q96BK5 328 aaKnown RBP12.64□□□□□ -0.39
MBD1-217ENST00000588937 S1PR3Q99500 378 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 CCL13Q99616 98 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 WDR61Q9GZS3 305 aaKnown RBP12.64□□□□□ -0.39
MBD1-217ENST00000588937 IFI27L2Q9H2X8 130 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 UNKLQ9H9P5 680 aaKnown RBP12.64□□□□□ -0.39
MBD1-217ENST00000588937 ZZEF1O43149 2961 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 ZGRF1Q86YA3 2104 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 RBFOX3A6NFN3 312 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 GPR37O15354 613 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 LINC00574Q9H8X3 128 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 IDI2-AS1Q9NZ38 188 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 TIMM9Q9Y5J7 89 aa12.64□□□□□ -0.39
MBD1-217ENST00000588937 TRAV1-1A0A0B4J248 108 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 CEBPZOSA8MTT3 80 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 PROP1O75360 226 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 SELLP14151 372 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 ZNF134P52741 427 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 RPP30P78346 268 aaKnown RBP12.63□□□□□ -0.39
MBD1-217ENST00000588937 CCL8P80075 99 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 TMEM88Q6PEY1 159 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 SFT2D1Q8WV19 159 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 PLPPR2Q96GM1 343 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 ADTRPQ96IZ2 230 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 OR4C12Q96R67 309 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms