RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 IFFO1Q0D2I5 559 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 DYNC1I2Q13409 638 aaKnown RBP1.68□□□□□ -2.14
VAPA-208ENST00000584796 TPBGQ13641 420 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 PSG5Q15238 335 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 PRR4Q16378 134 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 PAGE3Q5JUK9 113 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 C1orf100Q5SVJ3 147 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 FAM201AQ5SY85 155 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 IDNKQ5T6J7 187 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 FBXW9Q5XUX1 488 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 SLC48A1Q6P1K1 146 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 MED27Q6P2C8 311 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 CNIH2Q6PI25 160 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 SCIMPQ6UWF3 145 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 UNQ9370/PRO34162Q6UXP9 181 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 CASP12Q6UXS9 341 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 ZNF620Q6ZNG0 422 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 PAGE2Q7Z2X7 111 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 COMMD6Q7Z4G1 85 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 MRPL52Q86TS9 123 aaKnown RBP1.68□□□□□ -2.14
VAPA-208ENST00000584796 PDZD9Q8IXQ8 264 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 BOD1L2Q8IYS8 172 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 C6orf223Q8N319 242 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 TBC1D19Q8N5T2 526 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 OR4M2Q8NGB6 313 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 OR4F15Q8NGB8 312 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 OR52E2Q8NGJ4 325 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 OR6Q1Q8NGQ2 317 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 OR10Z1Q8NGY1 313 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 OR5AK3PQ8NH89 298 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 FANK1Q8TC84 345 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 ZNF675Q8TD23 568 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 ZFP90Q8TF47 636 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 TMEM234Q8WY98 164 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 ARPC1AQ92747 370 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 CDS1Q92903 461 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 RAB8BQ92930 207 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 TMEM230Q96A57 120 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 EXOSC8Q96B26 276 aaKnown RBP1.68□□□□□ -2.14
VAPA-208ENST00000584796 VSIG2Q96IQ7 327 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 ZNF75AQ96N20 296 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 RSG1Q9BU20 258 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 ZNF426Q9BUY5 554 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 OR51B6Q9H340 312 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 WDR55Q9H6Y2 383 aaPredicted RBP1.68□□□□□ -2.14
VAPA-208ENST00000584796 METTL8Q9H825 291 aaKnown RBP1.68□□□□□ -2.14
VAPA-208ENST00000584796 TMBIM4Q9HC24 238 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 DYNLRB1Q9NP97 96 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 MYOZ1Q9NP98 299 aaPredicted RBP1.68□□□□□ -2.14
VAPA-208ENST00000584796 SLC25A37Q9NYZ2 338 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 XCL2Q9UBD3 114 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 ATPIF1Q9UII2 106 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 RPUSD1Q9UJJ7 312 aaKnown RBP1.68□□□□□ -2.14
VAPA-208ENST00000584796 ACOT9Q9Y305 439 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 UGT2A1Q9Y4X1 527 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 OR51B2Q9Y5P1 312 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 FLVCR1Q9Y5Y0 555 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 VPS13BQ7Z7G8 4022 aa1.68□□□□□ -2.14
VAPA-208ENST00000584796 IGKV1D-13A0A0B4J2D9 117 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 A0A0B4J2E0 115 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 KIR2DL5BA0A0G2JN68 375 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 KIR2DL5BA0A0G2JPC4 375 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 IGHV3-64DA0A0J9YX35 117 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 SMIM23A6NLE4 172 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 NCBP2LA6PVI3 153 aaKnown RBP1.67□□□□□ -2.14
VAPA-208ENST00000584796 J3QLI3 93 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 UPK1AO00322 258 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 GABRPO00591 440 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 CRXO43186 299 aaPredicted RBP1.67□□□□□ -2.14
VAPA-208ENST00000584796 ENSAO43768 121 aaKnown RBP1.67□□□□□ -2.14
VAPA-208ENST00000584796 FOXH1O75593 365 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 STK16O75716 305 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 OPN1SWP03999 348 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 SEMG1P04279 462 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 CTXN2P0C2S0 81 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 OCM2P0CE71 109 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 GKN3PP0CG01 181 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 PGA5P0DJD9 388 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 IGKV1-13P0DP09 117 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 PSKH1P11801 424 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 ZP3P21754 424 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 FMO3P31513 532 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 GABRA3P34903 492 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 PFN2P35080 140 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 MPV17P39210 176 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 CEACAM3P40198 252 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 CDKN2CP42773 168 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 P2RY4P51582 365 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 RWDD2BP57060 319 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 ACTBP60709 375 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 FGF12P61328 243 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 GNB2P62879 340 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 RPL18AQ02543 176 aaKnown RBP1.67□□□□□ -2.14
VAPA-208ENST00000584796 TGFBR3Q03167 851 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 C2orf54Q08AI8 447 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 ZNF763Q0D2J5 394 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 ASAH1Q13510 395 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 FLOT2Q14254 428 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 QPRTQ15274 297 aa1.67□□□□□ -2.14
VAPA-208ENST00000584796 UAP1Q16222 522 aaPredicted RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms