RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 CCDC112Q8NEF3 446 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 DCANP1Q8TF63 244 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 OR52B2Q96RD2 323 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 HDHD2Q9H0R4 259 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 PSMD13Q9UNM6 376 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 HDGFL3Q9Y3E1 203 aa1.42□□□□□ -2.18
SMCHD1-204ENST00000581226 FN1P02751 2386 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 HEATR5AQ86XA9 2040 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 TMED7-TICAM2A0A0A6YYA0 188 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 IGHV3-15A0A0B4J1V0 119 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 MUC21A0A0G2JKD1 596 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 MUC21A0A140T8X8 626 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 COPEO14579 308 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 IL6P05231 212 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 REG1AP05451 166 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 SLC25A16P16260 332 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 CRHBPP24387 322 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 FABP5Q01469 135 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 MLLT11Q13015 90 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 JOSD1Q15040 202 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 TPRXLQ17RH7 258 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 SAPCD1Q5SSQ6 148 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 FAM151BQ6UXP7 276 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 PACRGLQ8N7B6 248 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 OR10A6Q8NH74 314 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 FNDC9Q8TBE3 224 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 Q8WTZ3 238 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 EEF1AKMT1Q8WVE0 214 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 PACRGQ96M98 296 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 KCTD7Q96MP8 289 aa1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 NOSIPQ9Y314 301 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-204ENST00000581226 CPAMD8Q8IZJ3 1885 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 DHRS12A0PJE2 317 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 SLC17A3O00476 420 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 C8orf88P0DMB2 117 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 CD36P16671 472 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 CA7P43166 264 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 MED21Q13503 144 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 GNA13Q14344 377 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 SLC36A2Q495M3 483 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 TMEM31Q5JXX7 168 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 CDKL4Q5MAI5 379 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 SPATA12Q7Z6I5 190 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 FAM9CQ8IZT9 166 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 C16orf78Q8WTQ4 265 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 CYGBQ8WWM9 190 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 ZNF625Q96I27 306 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 TIPINQ9BVW5 301 aa1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 TXNL4BQ9NX01 149 aaKnown RBP1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 KLK5Q9Y337 293 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 PCYT1BQ9Y5K3 369 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-204ENST00000581226 KIF15Q9NS87 1388 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 TEX50A0A1B0GTY4 177 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 SIGLEC16A6NMB1 481 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 OR5K4A6NMS3 321 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 STX10O60499 249 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 CTBP2P56545 445 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 HLA-DRB3P79483 266 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 PPP1R1AQ13522 171 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 COTL1Q14019 142 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 Q6ZSA8 131 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 IQCF2Q8IXL9 164 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 TMEM161BQ8NDZ6 487 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 DDI1Q8WTU0 396 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 TMBIM1Q969X1 311 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 CMTM5Q96DZ9 223 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 EIF5A2Q9GZV4 153 aaKnown RBP1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 SNX12Q9UMY4 172 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 ALG5Q9Y673 324 aa1.39□□□□□ -2.19
SMCHD1-204ENST00000581226 GREB1Q4ZG55 1949 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 ABCC12Q96J65 1359 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 TRAV8-1A0A0A6YYK1 113 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 A0A0G2JQZ4 141 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 OR11H12B2RN74 326 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 CXCR6O00574 342 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 GSTZ1O43708 216 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 TYMSP04818 313 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 TPM3P06753 285 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 MAGEA2P43356 314 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 TPM4P67936 248 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 NAA40Q86UY6 237 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 GPHB5Q86YW7 130 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 LRRC34Q8IZ02 419 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 Q8N402 240 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 CNEP1R1Q8N9A8 125 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 OR11H2Q8NH07 326 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 OR4X1Q8NH49 305 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 CLDND2Q8NHS1 167 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 CPNE2Q96FN4 548 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 MGLLQ99685 303 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 DHRS9Q9BPW9 319 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 PECRQ9BY49 303 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 PARD6GQ9BYG4 376 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 NKX6-2Q9C056 277 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 MAP1LC3AQ9H492 121 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 SLC2A9Q9NRM0 540 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 EMC3Q9P0I2 261 aa1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 AMMECR1Q9Y4X0 333 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-204ENST00000581226 PXDNLA1KZ92 1463 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms