RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 SLC35E3Q7Z769 313 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 LINC00518Q8N0U6 118 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZFP82Q8N141 532 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZNF561Q8N587 486 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CYB561D1Q8N8Q1 229 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 OR10P1Q8NGE3 313 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 MALSU1Q96EH3 234 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 P2RX4Q99571 388 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 MAP1LC3BQ9GZQ8 125 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RNF7Q9UBF6 113 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 GAB2Q9UQC2 676 aa7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CHD3Q12873 2000 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-208ENST00000578525 MARCH11A6NNE9 402 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 A8MXE2 369 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 MKRN2OSH3BPM6 223 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FCGR3BO75015 233 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 OR2C1O95371 312 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 MBP02144 154 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ARG1P05089 322 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FBP1P09467 338 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 OR9G9P0C7N8 305 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CGB3P0DN86 165 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CGB7P0DN87 165 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 AGAP20933 346 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FGF7P21781 194 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 TNFSF4P23510 183 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 TAGLN2P37802 199 aaKnown RBP7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RAB7AP51149 207 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CEBPGP53567 150 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 EDDM3BP56851 147 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 LOXL3P58215 753 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ERVK-16P61578 105 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 GNB2P62879 340 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 TNFAIP6P98066 277 aaPredicted RBP7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 PRAMEF5Q5TYX0 476 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SSX7Q7RTT5 188 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 MRGPRGQ86SM5 289 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 NUP37Q8NFH4 326 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 C2CD4CQ8TF44 421 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZDHHC16Q969W1 377 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ISOC2Q96AB3 205 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SDSLQ96GA7 329 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 YPEL4Q96NS1 127 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 NIPSNAP3BQ9BS92 247 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 QTRT1Q9BXR0 403 aaKnown RBP7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 IFI27L2Q9H2X8 130 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZNF665Q9H7R5 613 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SIRT7Q9NRC8 400 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SLC39A9Q9NUM3 307 aa7.75□□□□□ -1.17
CDK5RAP3-208ENST00000578525 KNTC1P50748 2209 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CTXND1A0A1B0GTU2 59 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZFP92A6NM28 416 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 C15orf62A8K5M9 175 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 C17orf112F2Z3M2 114 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 PROP1O75360 226 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 NDUFS6O75380 124 aaKnown RBP7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RBMXL2O75526 392 aaKnown RBP7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 IGHV1-46P01743 117 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CD40P25942 277 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RPL35P42766 123 aaKnown RBP7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 AKR1D1P51857 326 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FGF8P55075 233 aaPredicted RBP7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SPCS3P61009 180 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RPP30P78346 268 aaKnown RBP7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 DLK1P80370 383 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 C17orf58Q2M2W7 97 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 TMEM30BQ3MIR4 351 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FAM90A2PQ658T7 463 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 STUMQ69YW2 141 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ACSM6Q6P461 480 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FAM24BQ8N5W8 94 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 OR52E5Q8NH55 327 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 Q8TCH9 128 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CA5BP1Q8WTZ4 195 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 LHX4Q969G2 390 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 GAFA1Q96PS6 74 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 S1PR3Q99500 378 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 GFOD1Q9NXC2 390 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 IL19Q9UHD0 177 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 VAX2Q9UIW0 290 aa7.74□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CACNA1GO43497 2377 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 TRGV10A0A0A0MS01 117 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 KBTBD11-OT1A0A1B0GTJ5 212 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 hCG_1809904A0A1W2PP81 198 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 A0A1W2PR64 198 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 A0A1W2PRV1 198 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 B4DEV8 164 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SLC31A2O15432 143 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 IFNA17P01571 189 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 IGKV1D-33P01593 117 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 IGKV1-33P01594 117 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CD55P08174 381 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 MDKP21741 143 aaPredicted RBP7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CCKARP32238 428 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 THBS3P49746 956 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 TDGF1P3P51864 188 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 LINC00205P59089 165 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 OR2B8PP59922 312 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RAB11AP62491 216 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms