RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 LRP5LA4QPB2 252 aa9.25□□□□□ -0.93
CLK3-226ENST00000569406 LAMTOR5O43504 91 aa9.25□□□□□ -0.93
CLK3-226ENST00000569406 AMY2BP19961 511 aa9.25□□□□□ -0.93
CLK3-226ENST00000569406 GFERP55789 205 aa9.25□□□□□ -0.93
CLK3-226ENST00000569406 MTCP1P56278 107 aa9.25□□□□□ -0.93
CLK3-226ENST00000569406 CD226Q15762 336 aa9.25□□□□□ -0.93
CLK3-226ENST00000569406 PLCXD3Q63HM9 321 aa9.25□□□□□ -0.93
CLK3-226ENST00000569406 UFSP1Q6NVU6 142 aa9.25□□□□□ -0.93
CLK3-226ENST00000569406 PPP1R14AQ96A00 147 aa9.25□□□□□ -0.93
CLK3-226ENST00000569406 HSPB8Q9UJY1 196 aa9.25□□□□□ -0.93
CLK3-226ENST00000569406 A0A1W2PR80 420 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 KBTBD11O94819 623 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 KRASP01116 189 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 SLC25A6P12236 298 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 ZNF823P16415 610 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 EGR4Q05215 589 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 MEP1BQ16820 701 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 LINC00696Q6ZRV3 163 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 RAB37Q96AX2 223 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 P2RX4Q99571 388 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 TUBD1Q9UJT1 453 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 B3GALT5Q9Y2C3 310 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 ASPMQ8IZT6 3477 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 TRBV5-7A0A0A0MS05 114 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 P2RY10O00398 339 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 FCN1O00602 326 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 SLC16A7O60669 478 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 LHX2P50458 406 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 SSBP2P81877 361 aaPredicted RBP9.24□□□□□ -0.93
CLK3-226ENST00000569406 ATP5G2Q06055 141 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 MFGE8Q08431 387 aaPredicted RBP9.24□□□□□ -0.93
CLK3-226ENST00000569406 PMCHL1Q16048 86 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 ABHD17BQ5VST6 288 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 C1QL3Q5VWW1 255 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 DOLPP1Q86YN1 238 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 BCORP1Q8N888 145 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 ZNF439Q8NDP4 499 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 OR52E5Q8NH55 327 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 MMABQ96EY8 250 aaPredicted RBP9.24□□□□□ -0.93
CLK3-226ENST00000569406 SPACA5Q96QH8 159 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 ANAPC13Q9BS18 74 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 ERRFI1Q9UJM3 462 aaPredicted RBP9.24□□□□□ -0.93
CLK3-226ENST00000569406 IFNA1P01562 189 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 GGTLC2Q14390 218 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 MARCH3Q86UD3 253 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 HAPLN4Q86UW8 402 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 LRRC75AQ8NAA5 344 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 GNPNAT1Q96EK6 184 aaPredicted RBP9.24□□□□□ -0.93
CLK3-226ENST00000569406 CLEC7AQ9BXN2 247 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 TRAPPC2LQ9UL33 140 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 KNTC1P50748 2209 aa9.24□□□□□ -0.93
CLK3-226ENST00000569406 WIPF3A6NGB9 483 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 K7EP34 96 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 HMGB3O15347 200 aaKnown RBP9.23□□□□□ -0.93
CLK3-226ENST00000569406 UPK3AO75631 287 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 GPR12P47775 334 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 GPM6AP51674 278 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 HLA-DRB5Q30154 266 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 ANXA2RQ3ZCQ2 193 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 OR2C3Q8N628 320 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 NINJ1Q92982 152 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 MOB1AQ9H8S9 216 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 WDR76Q9H967 626 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 PNRC2Q9NPJ4 139 aaKnown RBP9.23□□□□□ -0.93
CLK3-226ENST00000569406 B3GALT1Q9Y5Z6 326 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 SPCS1Q9Y6A9 102 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 J3QR06 171 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 MPPED1O15442 326 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 CA1P00915 261 aaPredicted RBP9.23□□□□□ -0.93
CLK3-226ENST00000569406 IL13RA2Q14627 380 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 ACKR1Q16570 336 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 LINC01590Q5TEZ4 76 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 CBLN3Q6UW01 205 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 OR8B12Q8NGG6 310 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 OR4F5Q8NH21 305 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 BOKQ9UMX3 212 aaPredicted RBP9.23□□□□□ -0.93
CLK3-226ENST00000569406 TMEM212A6NML5 194 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 C17orf112F2Z3M2 114 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 F2RL2O00254 374 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 ISLRO14498 428 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 ZNF737O75373 536 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 C1QTNF9P0C862 333 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 OR5D14Q8NGL3 314 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 OR10AG1Q8NH19 301 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 TMEM171Q8WVE6 324 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 STRADBQ9C0K7 418 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 GNB4Q9HAV0 340 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 DECR2Q9NUI1 292 aa9.23□□□□□ -0.93
CLK3-226ENST00000569406 IGKV3D-11A0A0A0MRZ8 115 aa9.22□□□□□ -0.93
CLK3-226ENST00000569406 CA2P00918 260 aa9.22□□□□□ -0.93
CLK3-226ENST00000569406 LYZL2Q7Z4W2 148 aa9.22□□□□□ -0.93
CLK3-226ENST00000569406 LINC00346Q8IVM7 164 aa9.22□□□□□ -0.93
CLK3-226ENST00000569406 DEFB119Q8N690 84 aa9.22□□□□□ -0.93
CLK3-226ENST00000569406 JMJD8Q96S16 334 aa9.22□□□□□ -0.93
CLK3-226ENST00000569406 TM2D1Q9BX74 207 aa9.22□□□□□ -0.93
CLK3-226ENST00000569406 QTRT1Q9BXR0 403 aaKnown RBP9.22□□□□□ -0.93
CLK3-226ENST00000569406 ZNF576Q9H609 170 aa9.22□□□□□ -0.93
CLK3-226ENST00000569406 TAAR3PQ9P1P4 343 aa9.22□□□□□ -0.93
CLK3-226ENST00000569406 FREM3P0C091 2139 aa9.22□□□□□ -0.93
CLK3-226ENST00000569406 ANKRD30BLA7E2S9 258 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms