RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 RHOGP84095 191 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 MED21Q13503 144 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 LY6G6FQ5SQ64 297 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 PACRGLQ8N7B6 248 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 ZNF645Q8N7E2 425 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 STPG3Q8N7X2 389 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 MRPL30Q8TCC3 161 aaKnown RBP8.67□□□□□ -1.02
CLK3-222ENST00000568232 S100A13Q99584 98 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 TSNAXQ99598 290 aaKnown RBP8.67□□□□□ -1.02
CLK3-222ENST00000568232 ALG8Q9BVK2 526 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 RAB26Q9ULW5 256 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.66□□□□□ -1.02
CLK3-222ENST00000568232 E9PI62 339 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 J3QRE1 110 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 PROP1O75360 226 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 SC5DO75845 299 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 SPDEFO95238 335 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 ZNF93P35789 620 aaPredicted RBP8.66□□□□□ -1.02
CLK3-222ENST00000568232 POLR2IP36954 125 aaKnown RBP8.66□□□□□ -1.02
CLK3-222ENST00000568232 TCTAP57738 103 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 ATP5G2Q06055 141 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 ANKRD55Q3KP44 614 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 DDI2Q5TDH0 399 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 IZUMO2Q6UXV1 221 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 UXS1Q8NBZ7 420 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 ADAD2Q8NCV1 583 aaKnown RBP8.66□□□□□ -1.02
CLK3-222ENST00000568232 OR5AK2Q8NH90 309 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 NRG4Q8WWG1 115 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 IL1F10Q8WWZ1 152 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 THRSPQ92748 146 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 GALMQ96C23 342 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 ORAI1Q96D31 301 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 TMEM68Q96MH6 324 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 MFFQ9GZY8 342 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 RIBC2Q9H4K1 309 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 ISG20L2Q9H9L3 353 aaKnown RBP8.66□□□□□ -1.02
CLK3-222ENST00000568232 SPACA1Q9HBV2 294 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 FBXL7Q9UJT9 491 aa8.66□□□□□ -1.02
CLK3-222ENST00000568232 TMEM213A2RRL7 107 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 LGALS9O00182 355 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 DEFB4AO15263 64 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 DENRO43583 198 aaKnown RBP8.65□□□□□ -1.02
CLK3-222ENST00000568232 IGLV2-23P01705 113 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 MFAP2P55001 183 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 BTNL8Q6UX41 500 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 AMIGO2Q86SJ2 522 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 ZNF383Q8NA42 475 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 FAM46BQ96A09 425 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 PHB2Q99623 299 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 JAM3Q9BX67 310 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 PAK1IP1Q9NWT1 392 aaPredicted RBP8.65□□□□□ -1.02
CLK3-222ENST00000568232 STEAP1Q9UHE8 339 aa8.65□□□□□ -1.02
CLK3-222ENST00000568232 KIR2DL5BA0A0G2JN68 375 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 KIR2DL5BA0A0G2JPC4 375 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 ZNF320A2RRD8 509 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 TMEM212A6NML5 194 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 ZNF780AO75290 641 aaPredicted RBP8.64□□□□□ -1.03
CLK3-222ENST00000568232 CA11O75493 328 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 CRYGBP07316 175 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 OR9G9P0C7N8 305 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 TMED1Q13445 227 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 MRGPRG-AS1Q2M3A8 158 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 SIGIRRQ6IA17 410 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 ZNF554Q86TJ5 538 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 LHFPL3Q86UP9 236 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 ZDHHC13Q8IUH4 622 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 KIR2DL5AQ8N109 375 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 OR1L6Q8NGR2 347 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 KIR2DL5BQ8NHK3 375 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 RFKQ969G6 155 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 NRBF2Q96F24 287 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 RARRES2Q99969 163 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 AGMATQ9BSE5 352 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 C9orf16Q9BUW7 83 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 BANF2Q9H503 90 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 TMEM138Q9NPI0 162 aa8.64□□□□□ -1.03
CLK3-222ENST00000568232 APOBP04114 4563 aaKnown RBP8.64□□□□□ -1.03
CLK3-222ENST00000568232 LRP1BQ9NZR2 4599 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 TRBV9A0A0B4J1U6 114 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 FAM223BA6NKX1 122 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 GGCTO75223 188 aaKnown RBP8.63□□□□□ -1.03
CLK3-222ENST00000568232 GPX5O75715 221 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 TUSC2O75896 110 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 S1PR2O95136 353 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 IGHV3-23P01764 117 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 HMGN3Q15651 99 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 ATP6AP1Q15904 470 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 FAM223AQ8IWN6 122 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 OR2C3Q8N628 320 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 OR8J1Q8NGP2 316 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 CENPNQ96H22 339 aaPredicted RBP8.63□□□□□ -1.03
CLK3-222ENST00000568232 MAP6D1Q9H9H5 199 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 NDUFA13Q9P0J0 144 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 GMPPBQ9Y5P6 360 aa8.63□□□□□ -1.03
CLK3-222ENST00000568232 OR2J3O76001 311 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 FUT3P21217 361 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 C15orf32Q32M92 178 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 TMEM177Q53S58 311 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 SLC25A30Q5SVS4 291 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 KDM4DQ6B0I6 523 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms