RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 IGLV1-50A0A075B6I6 118 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 IGKV3D-15A0A087WSY6 115 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 IGHV3-49A0A0A0MS15 119 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 IGHV3-72A0A0B4J1Y9 119 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 FAM236DA0A1B0GTK5 79 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 FAM159BA6NKW6 160 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF850A8MQ14 1090 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 C4orf51C9J302 202 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 F5H5P2 479 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 BHLHE40O14503 412 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 PDE6DO43924 150 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 SCO1O75880 301 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 ATG12O94817 140 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 IGLV3-25P01717 112 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 MAS1P04201 325 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 OR5G3P0C626 314 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 TLX1NBP0CAT3 122 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF883P0CG24 379 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 FAM236CP0DP71 79 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 CD28P10747 220 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 FGF6P10767 208 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 GTF2F2P13984 249 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 CTSEP14091 401 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 CD34P28906 385 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 PPP1CCP36873 323 aaKnown RBP2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 MNAT1P51948 309 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 RAB4BP61018 213 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 RPS24P62847 133 aaKnown RBP2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 GNG3P63215 75 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 HIST1H3AP68431 136 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 H3F3AP84243 136 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 RUNX1Q01196 453 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 EBPQ15125 230 aaKnown RBP2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 KCNJ8Q15842 424 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 IL17AQ16552 155 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 ALKAL1Q6UXT8 129 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 TMPPEQ6ZT21 453 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF550Q7Z398 422 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 ORMDL3Q8N138 153 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF555Q8NEP9 628 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 OR2M3Q8NG83 312 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 OR4X1Q8NH49 305 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 OR5W2Q8NH69 310 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 OR13C6PQ8NH95 151 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 KCTD4Q8WVF5 259 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 BORCS7Q96B45 105 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 REEP6Q96HR9 211 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 OR52E6Q96RD3 313 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 FAM107BQ9H098 131 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 CXorf21Q9HAI6 301 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 HMG20AQ9NP66 347 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 UBQLN4Q9NRR5 601 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 CISHQ9NSE2 258 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 IDI2-AS1Q9NZ38 188 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 DNAJC12Q9UKB3 198 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 ANGPT4Q9Y264 503 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 CARHSP1Q9Y2V2 147 aaKnown RBP2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 NDUFAF1Q9Y375 327 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 PCYT1BQ9Y5K3 369 aaPredicted RBP2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 ERBINQ96RT1 1412 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 KIAA1107Q9UPP5 1409 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 TRPM2O94759 1503 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 ARHGEF5Q12774 1597 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 PEAK1Q9H792 1746 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 LAMA2P24043 3122 aaKnown RBP2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 IGKV1-6A0A0C4DH72 117 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 A0A1B0GVX0 72 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 INMT-MINDY4F8WBC2 141 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 STK16O75716 305 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 CDRT1O95170 752 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 IGKV1-39P01597 117 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 HLA-DQB1P01920 261 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 TTRP02766 147 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 IGKV1D-39P04432 117 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 HLA-DQB2P05538 268 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 KLK2P20151 261 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 SERPINB1P30740 379 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 GABRA3P34903 492 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 HSPA9P38646 679 aaKnown RBP2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 S100A12P80511 92 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 TSNQ15631 228 aaKnown RBP2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 RNASE13Q5GAN3 156 aaKnown RBP2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 TEX30Q5JUR7 227 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 MRPL2Q5T653 305 aaKnown RBP2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 SBSNQ6UWP8 590 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 PCP2Q8IVA1 136 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 STX19Q8N4C7 294 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 ANKRD29Q8N6D5 301 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 LY6G5BQ8NDX9 201 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 OR51A2Q8NGJ7 313 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 OR10K1Q8NGX5 313 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 OR2T27Q8NH04 317 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 GRPEL2Q8TAA5 225 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 JOSD2Q8TAC2 188 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 GALMQ96C23 342 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 ABHD14BQ96IU4 210 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 OR2V2Q96R30 315 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 THTPAQ9BU02 230 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 TSSK6Q9BXA6 273 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms