RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SMPXQ9UHP9 88 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 A0A1B0GUS0 222 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 HRASP01112 189 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 LCN15Q6UWW0 184 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 RBMXL1Q96E39 390 aaKnown RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 ADOQ96SZ5 270 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 HDHD3Q9BSH5 251 aaPredicted RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 IL36GQ9NZH8 169 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 PRSS50Q9UI38 385 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 KNTC1P50748 2209 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 COL5A1P20908 1838 aaPredicted RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 ZNF840PA6NDX5 716 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 FGF17O60258 216 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 GYPEP15421 78 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 RNF144BQ7Z419 303 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 MARCH3Q86UD3 253 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 CMTM2Q8TAZ6 248 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 RARRES3Q9UL19 164 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 RLFQ13129 1914 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 A4D1N5 150 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 H7C2G1 150 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 UBE2L6O14933 153 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 KBTBD11O94819 623 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 REG1AP05451 166 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 NKX2-1P43699 371 aaPredicted RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 EMP2P54851 167 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 FGF8P55075 233 aaPredicted RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 SHISA5Q8N114 240 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 FBXL14Q8N1E6 418 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 OR1L3Q8NH93 324 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 RNF183Q96D59 192 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 TMEM204Q9BSN7 226 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 NAA60Q9H7X0 242 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 COL4A5P29400 1685 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 TNRC6AQ8NDV7 1962 aaKnown RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 HCFC1P51610 2035 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 HCRTR1O43613 425 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 PRSS1P07477 247 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 CDKN1AP38936 164 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 TM4SF4P48230 202 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 FUT7Q11130 342 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 LY6DQ14210 128 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 OCIAD2Q56VL3 154 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 MRPL2Q5T653 305 aaKnown RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 C1orf122Q6ZSJ8 110 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 MOB3BQ86TA1 216 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 GVQW1Q8N7I0 195 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 TMEM186Q96B77 213 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 FOXC2Q99958 501 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 HES7Q9BYE0 225 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 IFI27L2Q9H2X8 130 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 CLN8Q9UBY8 286 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 GDF9O60383 454 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 TMEM50AO95807 157 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 ACRP10323 421 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 CPMP14384 443 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 GALR1P47211 349 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 VN1R4Q7Z5H5 301 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 DNAJB12Q9NXW2 375 aaKnown RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 WNT6Q9Y6F9 365 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 PRRG2O14669 202 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 NKX2-2O95096 273 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 FAM3BP58499 235 aaPredicted RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 ZNF90Q03938 601 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 FAM53BQ14153 422 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 OR5D13Q8NGL4 314 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 OR10S1Q8NGN2 331 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 WDYHV1Q96HA8 205 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 TMEM56Q96MV1 263 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 TMEM56-RWDD3S4R434 201 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 IGHV2-26A0A0B4J1V2 119 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 IGLC7A0M8Q6 106 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 NDUFC1O43677 76 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 NGFRP08138 427 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 CLDN17P56750 224 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 OR8B8Q15620 311 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 RASL11AQ6T310 242 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 SLC16A11Q8NCK7 471 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 OR2T10Q8NGZ9 312 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 ZNF721Q8TF20 911 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 CLUHP3Q96NS8 147 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 TSPAN32Q96QS1 320 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 ZDBF2Q9HCK1 2354 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 SERINC4A6NH21 518 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 MSTNO14793 375 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 FOXS1O43638 330 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 SMIM17P0DL12 118 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 CNN1P51911 297 aaKnown RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 TAS2R45P59539 299 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 MRPL23Q16540 153 aaKnown RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 ZNF672Q499Z4 452 aaPredicted RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 TMEM251Q8N6I4 163 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 WIPF2Q8TF74 440 aaPredicted RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 RTN4IP1Q8WWV3 396 aaPredicted RBP2.51□□□□□ -2.01
CHD9-218ENST00000566029 S1PR3Q99500 378 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 PXMP4Q9Y6I8 212 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 TEX50A0A1B0GTY4 177 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 C22orf46C9J442 243 aa2.51□□□□□ -2.01
CHD9-218ENST00000566029 PITX3O75364 302 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms