RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 CITED1Q99966 193 aa4.92□□□□□ -1.62
CNOT1-204ENST00000563130 PRSS22Q9GZN4 317 aa4.92□□□□□ -1.62
CNOT1-204ENST00000563130 SLIRPQ9GZT3 109 aaKnown RBP4.92□□□□□ -1.62
CNOT1-204ENST00000563130 MIXL1Q9H2W2 232 aa4.92□□□□□ -1.62
CNOT1-204ENST00000563130 CCDC59Q9P031 241 aaKnown RBP4.92□□□□□ -1.62
CNOT1-204ENST00000563130 MOB4Q9Y3A3 225 aa4.92□□□□□ -1.62
CNOT1-204ENST00000563130 OR5H14A6NHG9 310 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 ZNF701M0R085 212 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-204ENST00000563130 CTDSP2O14595 271 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 SOX6P35712 828 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 HES1Q14469 280 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 HNF4GQ14541 408 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 ABCA11PQ4W5N1 156 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 FAM71E2Q8N5Q1 922 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 Q8N9W7 124 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 OR8H1Q8NGG4 311 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 GPX8Q8TED1 209 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 C5orf30Q96GV9 206 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 GINS4Q9BRT9 223 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 NXF2Q9GZY0 626 aaKnown RBP4.91□□□□□ -1.62
CNOT1-204ENST00000563130 SDHAF2Q9NX18 166 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 RNF150Q9ULK6 438 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 OR2W1Q9Y3N9 320 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 TRRAPQ9Y4A5 3859 aa4.91□□□□□ -1.62
CNOT1-204ENST00000563130 SMIM31A0A1B0GVY4 71 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 H0YJW9 148 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 IGLV2-14P01704 120 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 NFYAP23511 347 aaPredicted RBP4.9□□□□□ -1.62
CNOT1-204ENST00000563130 MC5RP33032 325 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 PRSS3P35030 304 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 GPR12P47775 334 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 F2RL1P55085 397 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 SRSF4Q08170 494 aaKnown RBP4.9□□□□□ -1.62
CNOT1-204ENST00000563130 ZNF383Q8NA42 475 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 BVESQ8NE79 360 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 OR5AP2Q8NGF4 316 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 RITA1Q96K30 269 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 OR2D2Q9H210 308 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 SCPEP1Q9HB40 452 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 LIN7CQ9NUP9 197 aaKnown RBP4.9□□□□□ -1.62
CNOT1-204ENST00000563130 ZNF221Q9UK13 617 aa4.9□□□□□ -1.62
CNOT1-204ENST00000563130 IGKV1D-13A0A0B4J2D9 117 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 MEIS3P1A6NDR6 274 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 SH2D7A6NKC9 451 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-204ENST00000563130 SULT1C2O00338 296 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 IGHG2P01859 326 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 IGKV1-13P0DP09 117 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 LINC00205P59089 165 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 ACTBP60709 375 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 ZNF660Q6AZW8 331 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-204ENST00000563130 FAM131AQ6UXB0 335 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 GLDNQ6ZMI3 551 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-204ENST00000563130 LYSMD2Q8IV50 215 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 DRAXINQ8NBI3 349 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-204ENST00000563130 NPBQ8NG41 125 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 DDB2Q92466 427 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 ABHD1Q96SE0 405 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 RNF5Q99942 180 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 EXTL2Q9UBQ6 330 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 RABL2BQ9UNT1 228 aa4.9□□□□□ -1.63
CNOT1-204ENST00000563130 MRPS7Q9Y2R9 242 aaKnown RBP4.9□□□□□ -1.63
CNOT1-204ENST00000563130 FAM25AB3EWG3 89 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 FAM25CB3EWG5 89 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 FAM25GB3EWG6 89 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 NOL3O60936 208 aaKnown RBP4.89□□□□□ -1.63
CNOT1-204ENST00000563130 RBBP9O75884 186 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 NDUFA3O95167 84 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 IGKV1-16P04430 117 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 OR5H8P0DN80 308 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 DUTP33316 252 aaKnown RBP4.89□□□□□ -1.63
CNOT1-204ENST00000563130 LUMP51884 338 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-204ENST00000563130 ARPC4P59998 168 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 EIF4EBP1Q13541 118 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-204ENST00000563130 CDK10Q15131 360 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 DHRS11Q6UWP2 260 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 LAX1Q8IWV1 398 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 KLHDC1Q8N7A1 406 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 GIMAP1Q8WWP7 306 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 NECAP2Q9NVZ3 263 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 RSL24D1Q9UHA3 163 aaKnown RBP4.89□□□□□ -1.63
CNOT1-204ENST00000563130 WASHC3Q9Y3C0 194 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 LINC01548A6NM66 108 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 NCBP2LA6PVI3 153 aaKnown RBP4.89□□□□□ -1.63
CNOT1-204ENST00000563130 LINC00473A8K010 186 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 M0R1X1 148 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 NBR2O15453 112 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 RGS5O15539 181 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 SLC22A5O76082 557 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 PPYP01298 95 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 FCER2P06734 321 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 CNTFRP26992 372 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 FCGR2CP31995 323 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 VDAC2P45880 294 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-204ENST00000563130 RFX2P48378 723 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 DYRK1AQ13627 763 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 MMDQ15546 238 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 MSMO1Q15800 293 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 PDPNQ86YL7 162 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 SNX29P2Q8IUI4 249 aa4.89□□□□□ -1.63
CNOT1-204ENST00000563130 ZNF645Q8N7E2 425 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms