RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 COL25A1Q9BXS0 654 aaPredicted RBP8.8□□□□□ -1
GTF3C1-202ENST00000561623 G6PC2Q9NQR9 355 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 IGHV1OR15-9A0A0B4J2B8 117 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 A0A0G2JK05 382 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 ZNF818PQ6ZRF7 136 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 FGFRL1Q8N441 504 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 IMMP2LQ96T52 175 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 PIMREGQ9BSJ6 248 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 DCTN5Q9BTE1 182 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 ZNF638Q14966 1978 aaKnown RBP8.8□□□□□ -1
GTF3C1-202ENST00000561623 A8MWL6 223 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 ZG16O60844 167 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 CRYBB3P26998 211 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 SSTR5P35346 364 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 HERPUD1Q15011 391 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 CT55Q8WUE5 264 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 HIGD1AQ9Y241 93 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 ABCA4P78363 2273 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 ZNF729A6NN14 1252 aaPredicted RBP8.8□□□□□ -1
GTF3C1-202ENST00000561623 HPRT1P00492 218 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 NUBP1P53384 320 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 ZP4Q12836 540 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 TRA2AQ13595 282 aaKnown RBP eCLIP8.8□□□□□ -15e-8■■□□□ 11.4
GTF3C1-202ENST00000561623 RNF222A6NCQ9 220 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 OR4A8P0C604 315 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 BTCP35070 178 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 KIR2DL1P43626 348 aaPredicted RBP8.8□□□□□ -1
GTF3C1-202ENST00000561623 KIR2DL2P43627 348 aaPredicted RBP8.8□□□□□ -1
GTF3C1-202ENST00000561623 SSPNQ14714 243 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 DGAT2L7PQ6IED9 249 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 MDP1Q86V88 176 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 OR1L8Q8NGR8 309 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 SSBP3Q9BWW4 388 aaPredicted RBP8.8□□□□□ -1
GTF3C1-202ENST00000561623 CLDN14O95500 239 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 TBX6O95947 436 aaPredicted RBP8.79□□□□□ -1
GTF3C1-202ENST00000561623 FGF12P61328 243 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 GLRX5Q86SX6 157 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 MMD2Q8IY49 270 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 Q8WTZ3 238 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 LSM10Q969L4 123 aaKnown RBP8.79□□□□□ -1
GTF3C1-202ENST00000561623 DNAJC4Q9NNZ3 241 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 LIFP15018 202 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 NXPH1P58417 271 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 STXBP6Q8NFX7 210 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 GUCD1Q96NT3 240 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 FOXC2Q99958 501 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 TMEM189A5PLL7 270 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 SNAI2O43623 268 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 ZNF506Q5JVG8 444 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 SPANXN1Q5VSR9 72 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 FAM131CQ96AQ9 280 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 HIST1H4GQ99525 98 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 AMMECR1Q9Y4X0 333 aaPredicted RBP8.79□□□□□ -1
GTF3C1-202ENST00000561623 LHFPL6Q9Y693 200 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 POLR2AP24928 1970 aaKnown RBP8.79□□□□□ -1
GTF3C1-202ENST00000561623 PTPRFP10586 1907 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 LINC00869P0C866 280 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 HOXA5P20719 270 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 EPHA8P29322 1005 aaPredicted RBP8.79□□□□□ -1
GTF3C1-202ENST00000561623 MAS1LP35410 378 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 LINC01590Q5TEZ4 76 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 BHLHA15Q7RTS1 189 aaPredicted RBP8.79□□□□□ -1
GTF3C1-202ENST00000561623 ZNF645Q8N7E2 425 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 TMEM45BQ96B21 275 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 CDC42EP3Q9UKI2 254 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 ZDBF2Q9HCK1 2354 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 KIAA1217Q5T5P2 1943 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 OR2H2O95918 312 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 MESP2Q0VG99 397 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 CEACAM21Q3KPI0 293 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 RNFT1Q5M7Z0 435 aa8.79□□□□□ -1
GTF3C1-202ENST00000561623 CEACAM18A8MTB9 384 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 BIVMQ86UB2 503 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 EAF1Q96JC9 268 aaPredicted RBP8.78□□□□□ -1
GTF3C1-202ENST00000561623 PGPA6NDG6 321 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 H3BTX0 84 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 THY1P04216 161 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 ADRA2AP08913 450 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 CKS2P33552 79 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 OR8B2Q96RD0 313 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 CRYBA2P53672 197 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 TMEM177Q53S58 311 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 GRAMD2BQ96HH9 432 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 GMPPAQ96IJ6 420 aaPredicted RBP8.78□□□□□ -1
GTF3C1-202ENST00000561623 OPN3Q9H1Y3 402 aaPredicted RBP8.78□□□□□ -1
GTF3C1-202ENST00000561623 DPRXA6NFQ7 191 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 HYPMO75409 117 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 COL4A1P02462 1669 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 STRCQ7RTU9 1775 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 IGKV1D-42A0A075B6H8 117 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 CA11O75493 328 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 NR2C2APQ86WQ0 139 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 HLA-DRB1P01911 266 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 CCL4P13236 92 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 CFHR1Q03591 330 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 TNFRSF9Q07011 255 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 P2RY6Q15077 328 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 Q5PR19 223 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 FAM27BQ5VT28 67 aa8.78□□□□□ -1
GTF3C1-202ENST00000561623 RNF7Q9UBF6 113 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms