RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PPIAL4EA0A075B759 164 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 PPIAL4DF5H284 164 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 ADRA2AP08913 450 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 PPIAL4FP0DN26 164 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 HOXD3P31249 432 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 S100A7L2Q5SY68 101 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 INO80CQ6PI98 192 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 PPIAL4AQ9Y536 164 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 RIPPLY3P57055 190 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 RPL32P62910 135 aaKnown RBP12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 CCL4L1Q8NHW4 92 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 TIMM23BQ5SRD1 257 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 PAQR9Q6ZVX9 377 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 THY1P04216 161 aa12.02□□□□□ -0.48
CSPG4P12-202ENST00000559989 C8orf88P0DMB2 117 aa12.02□□□□□ -0.48
CSPG4P12-202ENST00000559989 ZNF250P15622 560 aa12.02□□□□□ -0.48
CSPG4P12-202ENST00000559989 C14orf144Q96I85 54 aa12.02□□□□□ -0.48
CSPG4P12-202ENST00000559989 KBTBD11-OT1A0A1B0GTJ5 212 aa12.02□□□□□ -0.48
CSPG4P12-202ENST00000559989 KLKB1P03952 638 aa12.02□□□□□ -0.48
CSPG4P12-202ENST00000559989 FAM209AQ5JX71 171 aa12.02□□□□□ -0.48
CSPG4P12-202ENST00000559989 LRTM2Q8N967 370 aa12.02□□□□□ -0.48
CSPG4P12-202ENST00000559989 DCTN5Q9BTE1 182 aa12.02□□□□□ -0.48
CSPG4P12-202ENST00000559989 TINAGQ9UJW2 476 aa12.02□□□□□ -0.48
CSPG4P12-202ENST00000559989 TDRD6O60522 2096 aaKnown RBP12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 IFNL4K9M1U5 179 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 AGFG2O95081 481 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 SFTPCP11686 197 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 SOX8P57073 446 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 MARVELD3Q96A59 401 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 MRM2Q9UI43 246 aaKnown RBP12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 SLC25A53Q5H9E4 307 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 UNQ5815/PRO19632Q6UWF5 114 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 MMD2Q8IY49 270 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 TMEM174Q8WUU8 243 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 A0A1B0GTH9 108 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 NPPCP23582 126 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 GAGE2BQ13066 116 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 DOCK9Q9BZ29 2069 aa12.02□□□□□ -0.49
CSPG4P12-202ENST00000559989 NALCNQ8IZF0 1738 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 HOGA1Q86XE5 327 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 TMEM74BQ9NUR3 256 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 TMEM155Q4W5P6 130 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 CXorf66Q5JRM2 361 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 TAF15Q92804 592 aaKnown RBP eCLIP12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 A8MWV9 139 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 ISG15P05161 165 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 P2RY4P51582 365 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 TMEM86BQ8N661 226 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 PIMREGQ9BSJ6 248 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 HAX1O00165 279 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 DXOO77932 396 aaKnown RBP12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 KLK2P20151 261 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 C17orf47Q8NEP4 570 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 ORAOV1Q8WV07 137 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 PCSK4Q6UW60 755 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 WFDC5Q8TCV5 224 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 ZNF48Q96MX3 618 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 DUX3Q96PT4 197 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 LRRC61Q9BV99 259 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 SDF2L1Q9HCN8 221 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 PEX7O00628 323 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 WNT10AQ9GZT5 417 aa12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 FNDC4Q9H6D8 234 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P12-202ENST00000559989 KNDC1Q76NI1 1749 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 GRIFINA4D1Z8 144 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 C9JCJ5 164 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 DMKNQ6E0U4 476 aaPredicted RBP12□□□□□ -0.49
CSPG4P12-202ENST00000559989 OR4D11Q8NGI4 311 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 OPN3Q9H1Y3 402 aaPredicted RBP12□□□□□ -0.49
CSPG4P12-202ENST00000559989 LINC00614P0C842 121 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 HCP5Q6MZN7 132 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 MARS2Q96GW9 593 aaKnown RBP12□□□□□ -0.49
CSPG4P12-202ENST00000559989 A0A1B0GW15 77 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 APOHP02749 345 aaPredicted RBP12□□□□□ -0.49
CSPG4P12-202ENST00000559989 PLNP26678 52 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 KIAA1644Q3SXP7 199 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 CLDND2Q8NHS1 167 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 MRAPQ8TCY5 172 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 SPANXA1Q9NS26 97 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 SCN4AP35499 1836 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 SPINK14Q6IE38 97 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 ZNF257Q9Y2Q1 563 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 V9GYH0 126 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 TOMM40O96008 361 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 TMEM42Q69YG0 159 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 LINC00518Q8N0U6 118 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 KLHDC9Q8NEP7 349 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 ANKRD36A6QL64 1941 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 VWC2LB2RUY7 222 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 LURAP1LQ8IV03 231 aa12□□□□□ -0.49
CSPG4P12-202ENST00000559989 PRR32B1ATL7 298 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 PATE4P0C8F1 98 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 GPR6P46095 362 aaPredicted RBP11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 GPBAR1Q8TDU6 330 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 PDFQ9HBH1 243 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 PAX1P15863 534 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 CRYBB3P26998 211 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 OR4X2Q8NGF9 303 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms