RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 TENM4Q6N022 2769 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 DYSFO75923 2080 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 NFYBP25208 207 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 CD40P25942 277 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 ARL16Q0P5N6 197 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 LTC4SQ16873 150 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 SPSB3Q6PJ21 355 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 HAPLN4Q86UW8 402 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 THNSL2Q86YJ6 484 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 ZNF525Q8N782 197 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 FAM216AQ8WUB2 273 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 RBKSQ9H477 322 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 SMDT1Q9H4I9 107 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 NDRG3Q9UGV2 375 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 LAMP3Q9UQV4 416 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 FBXO7Q9Y3I1 522 aa12.03□□□□□ -0.48
RABGGTA-212ENST00000559974 UBR5O95071 2799 aaPredicted RBP12.02□□□□□ -0.48
RABGGTA-212ENST00000559974 MYO18BQ8IUG5 2567 aa12.02□□□□□ -0.48
RABGGTA-212ENST00000559974 A0A0G2JNJ9 132 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 LRRC30A6NM36 301 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 LINC00473A8K010 186 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 CLDN14O95500 239 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 GNLYP22749 145 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 CCKARP32238 428 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 SMUG1Q53HV7 270 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 SPANXN5Q5MJ07 72 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 ZNRF1Q8ND25 227 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 SCGB1C1Q8TD33 95 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 SLC35B3Q9H1N7 401 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 GNG12Q9UBI6 72 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 Q9UFV3 132 aa12.02□□□□□ -0.49
RABGGTA-212ENST00000559974 TRGV8A0A0C4DH27 118 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 RAB29O14966 203 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 GPR12P47775 334 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 CCL20P78556 96 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 TLE4Q04727 773 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 HFEQ30201 348 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 MORN2Q502X0 79 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 SP5Q6BEB4 398 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 LILRB2Q8N423 598 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 FAM222BQ8WU58 562 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 HIPK2Q9H2X6 1198 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 KIAA1456Q9P272 454 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 IL19Q9UHD0 177 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 YPEL1O60688 119 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 IGHV1-46P01743 117 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 EDDM3BP56851 147 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 TNFAIP6P98066 277 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 TMEM14EPQ6UXP3 125 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 NUP37Q8NFH4 326 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 C14orf79Q96F83 325 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 YPEL2Q96QA6 119 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 PSMG3Q9BT73 122 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 GCM1Q9NP62 436 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 ELOVL5Q9NYP7 299 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 RNF7Q9UBF6 113 aa12.01□□□□□ -0.49
RABGGTA-212ENST00000559974 RBFOX3A6NFN3 312 aa12□□□□□ -0.49
RABGGTA-212ENST00000559974 F2RL2O00254 374 aa12□□□□□ -0.49
RABGGTA-212ENST00000559974 PPIHO43447 177 aaKnown RBP12□□□□□ -0.49
RABGGTA-212ENST00000559974 OR8U8P0C7N1 319 aa12□□□□□ -0.49
RABGGTA-212ENST00000559974 LRRC75BQ2VPJ9 315 aa12□□□□□ -0.49
RABGGTA-212ENST00000559974 H2BFWTQ7Z2G1 175 aa12□□□□□ -0.49
RABGGTA-212ENST00000559974 ZNF561Q8N587 486 aa12□□□□□ -0.49
RABGGTA-212ENST00000559974 CD300LFQ8TDQ1 290 aa12□□□□□ -0.49
RABGGTA-212ENST00000559974 RSG1Q9BU20 258 aa12□□□□□ -0.49
RABGGTA-212ENST00000559974 PARD6GQ9BYG4 376 aaPredicted RBP12□□□□□ -0.49
RABGGTA-212ENST00000559974 NCOR1P1Q9H4R4 102 aa12□□□□□ -0.49
RABGGTA-212ENST00000559974 OR6C3Q9NZP0 311 aa12□□□□□ -0.49
RABGGTA-212ENST00000559974 C16orf97H3BN30 126 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 HBE1P02100 147 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 TNFSF4P23510 183 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 DUTP33316 252 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 LOXL3P58215 753 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 LINC00205P59089 165 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 RAB2AP61019 212 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 SLC38A11Q08AI6 406 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 FAM201AQ5SY85 155 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 TMEM108Q6UXF1 575 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 SFT2D1Q8WV19 159 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 RARRES2Q99969 163 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 USP9XQ93008 2570 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 MARCH11A6NNE9 402 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 H7C2Y5 167 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 CDSNQ15517 529 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 NCR3LG1Q68D85 454 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 STUMQ69YW2 141 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 FAM122CQ6P4D5 195 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 RBMXL1Q96E39 390 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 PLPPR2Q96GM1 343 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 WDR61Q9GZS3 305 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 CALYQ9NYX4 217 aa11.99□□□□□ -0.49
RABGGTA-212ENST00000559974 PROP1O75360 226 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 SELLP14151 372 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 CA7P43166 264 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 AWAT1Q58HT5 328 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 OR8G2PQ6IF36 304 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 Q8TCH9 128 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 SDSLQ96GA7 329 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 OR4C12Q96R67 309 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms