RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MYOD1P15172 320 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 CBR1P16152 277 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 SERPINA2P20848 420 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 DTYMKP23919 212 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 SEC61A1P61619 476 aaKnown RBP4.19□□□□□ -1.74
SRP54-211ENST00000556445 ZNF92Q03936 586 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 P2RY6Q15077 328 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 SURF2Q15527 256 aaPredicted RBP4.19□□□□□ -1.74
SRP54-211ENST00000556445 MPPED2Q15777 294 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 GRK1Q15835 563 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 KCNJ8Q15842 424 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 RPEL1Q2QD12 228 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 VAX1Q5SQQ9 334 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 OR10K2Q6IF99 312 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 LPCAT3Q6P1A2 487 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 ATRAIDQ6UW56 229 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 TFAP2EQ6VUC0 442 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 FBXW12Q6X9E4 464 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 IDO2Q6ZQW0 420 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 SLC25A48Q6ZT89 311 aaKnown RBP4.19□□□□□ -1.74
SRP54-211ENST00000556445 LINC00336Q6ZUF6 198 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 LINC00596Q86U02 117 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 HOGA1Q86XE5 327 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 OSR2Q8N2R0 312 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 ZNF680Q8NEM1 530 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 SLC30A7Q8NEW0 376 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 OR10V1Q8NGI7 309 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 OR51S1Q8NGJ8 323 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 OR1J1Q8NGS3 322 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 OR5H2Q8NGV7 314 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 OR8S1Q8NH09 359 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 OR4K15Q8NH41 348 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 OR2AE1Q8NHA4 323 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 GRPEL2Q8TAA5 225 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 ZNF431Q8TF32 576 aaPredicted RBP4.19□□□□□ -1.74
SRP54-211ENST00000556445 NPRL2Q8WTW4 380 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 C1orf147Q96MC9 270 aaPredicted RBP4.19□□□□□ -1.74
SRP54-211ENST00000556445 SPACA5Q96QH8 159 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 CLCC1Q96S66 551 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 DHRS9Q9BPW9 319 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 PAPOLGQ9BWT3 736 aaKnown RBP4.19□□□□□ -1.74
SRP54-211ENST00000556445 SHARPINQ9H0F6 387 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 SIRT7Q9NRC8 400 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 PLEKHJ1Q9NW61 149 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 B3GNT2Q9NY97 397 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 IL36RNQ9UBH0 155 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 AMDHD2Q9Y303 409 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 TBL2Q9Y4P3 447 aaKnown RBP4.19□□□□□ -1.74
SRP54-211ENST00000556445 AUP1Q9Y679 476 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 MYO7BQ6PIF6 2116 aa4.19□□□□□ -1.74
SRP54-211ENST00000556445 TNRC6AQ8NDV7 1962 aaKnown RBP4.18□□□□□ -1.74
SRP54-211ENST00000556445 CNOT1A5YKK6 2376 aaKnown RBP4.18□□□□□ -1.74
SRP54-211ENST00000556445 MED12LQ86YW9 2145 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 PIGBOS1A0A0B4J2F0 54 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 A0A1W2PRF3 423 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 A0A1W2PRM7 423 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 CD300LBA8K4G0 201 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 TRAPPC2LH3BP13 241 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 CLDN34H7C241 214 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 SOCS1O15524 211 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 ZNHIT1O43257 154 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 PDCD6O75340 191 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 PATE4P0C8F1 98 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 FAM157CP0CG43 387 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 PTHLHP12272 177 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 GNB3P16520 340 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 COX5AP20674 150 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 FUT3P21217 361 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 TIMP3P35625 211 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 GNG3P63215 75 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 CYCSP99999 105 aaKnown RBP4.18□□□□□ -1.74
SRP54-211ENST00000556445 CD300CQ08708 224 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 PRDX4Q13162 271 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 RIGQ13278 110 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 FCN2Q15485 313 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 GUSBP1Q15486 140 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 MPV17LQ2QL34 196 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 CEACAM21Q3KPI0 293 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 CHRFAM7AQ494W8 412 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 ZNF672Q499Z4 452 aaPredicted RBP4.18□□□□□ -1.74
SRP54-211ENST00000556445 SCGB2B2Q4G0G5 96 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 NHLRC3Q5JS37 347 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 ELP2Q6IA86 826 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 ASCL5Q7RTU5 278 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 SLC36A1Q7Z2H8 476 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 MDP1Q86V88 176 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 Q8IYB0 196 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 SPAG16Q8N0X2 631 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 C12orf45Q8N5I9 185 aaPredicted RBP4.18□□□□□ -1.74
SRP54-211ENST00000556445 GVQW1Q8N7I0 195 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 CNEP1R1Q8N9A8 125 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 BEST4Q8NFU0 473 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 OR5D18Q8NGL1 313 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 OR51F2Q8NH61 342 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 TERB2Q8NHR7 220 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 ZFAND1Q8TCF1 268 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 RPEQ96AT9 228 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 MICU1Q9BPX6 476 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 NICN1Q9BSH3 213 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 PECRQ9BY49 303 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms