RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 OR11H2Q8NH07 326 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 CYGBQ8WWM9 190 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 RNASE6Q93091 150 aaKnown RBP0.98□□□□□ -2.25
SCFD1-218ENST00000556256 MS4A6EQ96DS6 147 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 SMIM19Q96E16 107 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 DCUN1D5Q9BTE7 237 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 NSRP1Q9H0G5 558 aaKnown RBP0.98□□□□□ -2.25
SCFD1-218ENST00000556256 SLC2A9Q9NRM0 540 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 SPANXB1Q9NS25 103 aaPredicted RBP0.98□□□□□ -2.25
SCFD1-218ENST00000556256 EMC3Q9P0I2 261 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 PSMD13Q9UNM6 376 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 HDGFL3Q9Y3E1 203 aa0.98□□□□□ -2.25
SCFD1-218ENST00000556256 THSD7AQ9UPZ6 1657 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 IGLV3-9A0A075B6K5 115 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 F5H768 121 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 BIRC5O15392 142 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 COCHO43405 550 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 IFNGR2P38484 337 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 EMP2P54851 167 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 RBM11P57052 281 aaKnown RBP0.97□□□□□ -2.25
SCFD1-218ENST00000556256 GNA13Q14344 377 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 KRTAP21-3Q3LHN1 58 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 AGTRAPQ6RW13 159 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 PLEKHG7Q6ZR37 379 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 SPATA12Q7Z6I5 190 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 LRRC34Q8IZ02 419 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 SMCR5Q8TEV8 140 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 DCANP1Q8TF63 244 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 SLC35G5Q96KT7 338 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 OR52B2Q96RD2 323 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 UPF3BQ9BZI7 483 aaKnown RBP0.97□□□□□ -2.25
SCFD1-218ENST00000556256 PLEKHJ1Q9NW61 149 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 NDUFB11Q9NX14 153 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 AMMECR1Q9Y4X0 333 aaPredicted RBP0.97□□□□□ -2.25
SCFD1-218ENST00000556256 PCYT1BQ9Y5K3 369 aaPredicted RBP0.97□□□□□ -2.25
SCFD1-218ENST00000556256 STRCP1A6NGW2 1772 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 SORL1Q92673 2214 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 RTEL1-TNFRSF6BF6WH68 1400 aa0.97□□□□□ -2.25
SCFD1-218ENST00000556256 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 OR6C6A6NF89 314 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 HLA-DRAP01903 254 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 IL6P05231 212 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 ALOX5APP20292 161 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 CXCR4P61073 352 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 HLA-DRB3P79483 266 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 JOSD1Q15040 202 aaPredicted RBP0.96□□□□□ -2.26
SCFD1-218ENST00000556256 TMEM31Q5JXX7 168 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 GLT6D1Q7Z4J2 308 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 SLC35F6Q8N357 371 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 TMEM251Q8N6I4 163 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 OR4X1Q8NH49 305 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 RPS4Y2Q8TD47 263 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 SPACA4Q8TDM5 124 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 TIPINQ9BVW5 301 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 DERL2Q9GZP9 239 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 PXDNLA1KZ92 1463 aa0.96□□□□□ -2.26
SCFD1-218ENST00000556256 CHD2O14647 1828 aaKnown RBP0.95□□□□□ -2.26
SCFD1-218ENST00000556256 A0A087WUU8 490 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 TMED7-TICAM2A0A0A6YYA0 188 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 A0A1W2PQD3 144 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 C5orf49A4QMS7 147 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 C2orf74A8MZ97 194 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 C9JCJ5 164 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 GOLGA8KD6RF30 607 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 GOLGA8MH3BSY2 632 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 UGT2B7P16662 529 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 TMEM33P57088 247 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 TAS2R30P59541 319 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 BTN3A2P78410 334 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 HOXC5Q00444 222 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 ZNF90Q03938 601 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 DMTNQ08495 405 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 PRDX4Q13162 271 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 MED21Q13503 144 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 PLPPR5Q32ZL2 321 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 Q6ZRN7 208 aaPredicted RBP0.95□□□□□ -2.26
SCFD1-218ENST00000556256 Q6ZTI0 123 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 GPHB5Q86YW7 130 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 BAP18Q8IXM2 172 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 Q8N402 240 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 TMEM156Q8N614 296 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 DAND5Q8N907 189 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 FGF13Q92913 245 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 MRPS24Q96EL2 167 aaKnown RBP0.95□□□□□ -2.26
SCFD1-218ENST00000556256 SFRP2Q96HF1 295 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 KCTD7Q96MP8 289 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 DHRS9Q9BPW9 319 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 MIEN1Q9BRT3 115 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 LLPHQ9BRT6 129 aaKnown RBP0.95□□□□□ -2.26
SCFD1-218ENST00000556256 HES4Q9HCC6 221 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 BAHCC1Q9P281 2608 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 ATG2BQ96BY7 2078 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 ABCC12Q96J65 1359 aa0.95□□□□□ -2.26
SCFD1-218ENST00000556256 ZNF638Q14966 1978 aaKnown RBP0.94□□□□□ -2.26
SCFD1-218ENST00000556256 TRGV5A0A0B4J1U4 118 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 C1orf232A0A0U1RR37 186 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 ARRDC5A6NEK1 342 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 ZNF860A6NHJ4 632 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 UBE2L6O14933 153 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 YEATS4O95619 227 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms