RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 C8orf88P0DMB2 117 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 CCL3P10147 92 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 CXCL2P19875 107 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 CXCL3P19876 107 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 CDC34P49427 236 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-217ENST00000555953 EMP2P54851 167 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 CXCR4P61073 352 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 RPS24P62847 133 aaKnown RBP1.18□□□□□ -2.22
SCFD1-217ENST00000555953 HPCAP84074 193 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 SS18Q15532 418 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 SLC36A2Q495M3 483 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 BAP18Q8IXM2 172 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 TMEM156Q8N614 296 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 C16orf78Q8WTQ4 265 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 PACRGQ96M98 296 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-217ENST00000555953 ZNF471Q9BX82 626 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-217ENST00000555953 NKX6-2Q9C056 277 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-217ENST00000555953 DRC3Q9H069 523 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 NSRP1Q9H0G5 558 aaKnown RBP1.18□□□□□ -2.22
SCFD1-217ENST00000555953 ZNHIT6Q9NWK9 470 aaKnown RBP1.18□□□□□ -2.22
SCFD1-217ENST00000555953 NKIRAS1Q9NYS0 192 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 PCYT1BQ9Y5K3 369 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-217ENST00000555953 MINOS1-NBL1R4GNA1 71 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 ABCC11Q96J66 1382 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 VWDEQ8N2E2 1590 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 MUC21A0A0G2JKD1 596 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 MUC21A0A140T8X8 626 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 A0A1W2PQL4 384 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-217ENST00000555953 C5orf49A4QMS7 147 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 OR11H12B2RN74 326 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 H3BPC8 53 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 M0R381 172 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 NDUFB2O95178 105 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 MT-CO2P00403 227 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 APOEP02649 317 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 GZMBP10144 247 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 COX5BP10606 129 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 UGT2B7P16662 529 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 CRYBB3P26998 211 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 DDTP30046 118 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 CD200P41217 278 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 HLA-DRB3P79483 266 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 GNA13Q14344 377 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 TMEM31Q5JXX7 168 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-217ENST00000555953 N4BP2L1Q5TBK1 243 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-217ENST00000555953 LGALS9CQ6DKI2 356 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 FAM151BQ6UXP7 276 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 C2orf91Q6ZV80 131 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 OR11H2Q8NH07 326 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 CMTM5Q96DZ9 223 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 MIEN1Q9BRT3 115 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 KLK5Q9Y337 293 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-217ENST00000555953 MPDZO75970 2070 aa1.17□□□□□ -2.22
SCFD1-217ENST00000555953 ADGRB3O60242 1522 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 IGHV3-15A0A0B4J1V0 119 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 SSNA1O43805 119 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 S1PR2O95136 353 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 KRT75O95678 551 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 CD36P16671 472 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 TMEM33P57088 247 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 DEFB103AP81534 67 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 MLLT11Q13015 90 aaPredicted RBP1.16□□□□□ -2.22
SCFD1-217ENST00000555953 UAP1Q16222 522 aaPredicted RBP1.16□□□□□ -2.22
SCFD1-217ENST00000555953 PLPPR5Q32ZL2 321 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 TNFAIP8L2Q6P589 184 aaPredicted RBP1.16□□□□□ -2.22
SCFD1-217ENST00000555953 AMTNQ6UX39 209 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 LRRC34Q8IZ02 419 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 JOSD2Q8TAC2 188 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 HAVCR2Q8TDQ0 301 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 EEF1AKMT1Q8WVE0 214 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 ANKRD36BP1Q96IX9 119 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 TXNDC17Q9BRA2 123 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 Q9BRP9 147 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 DERL2Q9GZP9 239 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 HES4Q9HCC6 221 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 USE1Q9NZ43 259 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 SIPA1L1O43166 1804 aa1.16□□□□□ -2.22
SCFD1-217ENST00000555953 OR6C6A6NF89 314 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 OR5K4A6NMS3 321 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 C2orf74A8MZ97 194 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 UBE2L6O14933 153 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 GNRH2O43555 120 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 NIPSNAP2O75323 286 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 IGHV1-69P01742 117 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 HLA-DRAP01903 254 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 P0DMU3 169 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 FAM231AP0DMU4 169 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 FAM231CP0DMU5 169 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 MAGEA2P43356 314 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 XCL1P47992 114 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 SERPINB10P48595 397 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 TBPL1P62380 186 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 HOXC5Q00444 222 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 HSP90B2PQ58FF3 399 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 OGFRL1Q5TC84 451 aaPredicted RBP1.15□□□□□ -2.23
SCFD1-217ENST00000555953 CST9Q5W186 159 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 NAA40Q86UY6 237 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 C1orf174Q8IYL3 243 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 UBL4BQ8N7F7 174 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms