RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SP6Q3SY56 376 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 LRRC37A5PQ49AS3 106 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 ESCO2Q56NI9 601 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 GGNBP1Q5YKI7 109 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 ADAM5Q6NVV9 412 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 PRSS54Q6PEW0 395 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 TEX261Q6UWH6 196 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 ACOT7LQ6ZUV0 252 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 TBC1D26Q86UD7 250 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 LDLRAD3Q86YD5 345 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 ZNF695Q8IW36 515 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 C1orf87Q8N0U7 546 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 ZNF561Q8N587 486 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 FAM222BQ8WU58 562 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 ARL6Q9H0F7 186 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 TMEM222Q9H0R3 208 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 NCOR1P1Q9H4R4 102 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 PLEKHF2Q9H8W4 249 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 CHODLQ9H9P2 273 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 BARX1Q9HBU1 254 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-204ENST00000555890 GCM1Q9NP62 436 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 BEX4Q9NWD9 120 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-204ENST00000555890 UBQLN2Q9UHD9 624 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 TNFSF18Q9UNG2 199 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 TMED3Q9Y3Q3 217 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 MAB21L2Q9Y586 359 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 U3KQ87 197 aa5.65□□□□□ -1.5
SLIRP-204ENST00000555890 STAB2Q8WWQ8 2551 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 USF3Q68DE3 2245 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 PLCE1Q9P212 2302 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 TANC2Q9HCD6 1990 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 IGKV1D-17A0A075B6S4 117 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 IGHV3OR15-7A0A075B7D8 119 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 TRAV39A0A0B4J263 110 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 IGKV1D-13A0A0B4J2D9 117 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.64□□□□□ -1.51
SLIRP-204ENST00000555890 KANTRA0A1W2PQU2 76 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 TUBAL3A6NHL2 446 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 NKX6-3A6NJ46 265 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 SHISA9B4DS77 424 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 C12orf77C9JDV5 145 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 E7EQL1 145 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 H0Y980 276 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 K7N7A8 449 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 HOXA3O43365 443 aaPredicted RBP5.64□□□□□ -1.51
SLIRP-204ENST00000555890 ATP6V1G1O75348 118 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 ZNF737O75373 536 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 PGLYRP1O75594 196 aaPredicted RBP5.64□□□□□ -1.51
SLIRP-204ENST00000555890 HBZP02008 142 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 WNT2P09544 360 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 IGKV1-13P0DP09 117 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 CD80P33681 288 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 GLIPR1P48060 266 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 AP2S1P53680 142 aaPredicted RBP5.64□□□□□ -1.51
SLIRP-204ENST00000555890 S100A10P60903 97 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 EDDM3AQ14507 147 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 ZNF345Q14585 488 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 EFNB3Q15768 340 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 MSMO1Q15800 293 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 SPRNQ5BIV9 151 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 ZNF818PQ6ZRF7 136 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 C5orf24Q7Z6I8 188 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 SLC51BQ86UW2 128 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 KCNRGQ8N5I3 272 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 ZNF680Q8NEM1 530 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 ANGPTL6Q8NI99 470 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 LINC01560Q8TB33 94 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 MRGPRDQ8TDS7 321 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 GLYATL2Q8WU03 294 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 DCUN1D4Q92564 292 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 IL22RA2Q969J5 263 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 ARL11Q969Q4 196 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 MSI2Q96DH6 328 aaKnown RBP5.64□□□□□ -1.51
SLIRP-204ENST00000555890 SDSLQ96GA7 329 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 COQ2Q96H96 371 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 OR10C1Q96KK4 312 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 TMEM56Q96MV1 263 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 SPIN2AQ99865 258 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 SPIN2BQ9BPZ2 258 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 TOLLIPQ9H0E2 274 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 SHARPINQ9H0F6 387 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 FAM234AQ9H0X4 552 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 ZNF665Q9H7R5 613 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 SAP30LQ9HAJ7 183 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 CISD1Q9NZ45 108 aaKnown RBP5.64□□□□□ -1.51
SLIRP-204ENST00000555890 OR6C3Q9NZP0 311 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 OR1A1Q9P1Q5 309 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 MBD2Q9UBB5 411 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 KCNS2Q9ULS6 477 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 RNF115Q9Y4L5 304 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 TMEM56-RWDD3S4R434 201 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 RAI1Q7Z5J4 1906 aaPredicted RBP5.64□□□□□ -1.51
SLIRP-204ENST00000555890 SACSQ9NZJ4 4579 aa5.64□□□□□ -1.51
SLIRP-204ENST00000555890 PPIAL4EA0A075B759 164 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 TRAV38-1A0A0B4J264 116 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 A0A1W2PPR1 153 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 ODAMA1E959 279 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 FAM90A9PA6NNJ1 464 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 PPIAL4DF5H284 164 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 LGALS8O00214 317 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms